RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ANO10Q9NW15 660 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 CEP83Q9Y592 693 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 TRIM49BA6NDI0 452 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP39-210ENST00000459775 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 CCL5P13501 91 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 ZNF165P49910 485 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 ZNF200P98182 395 aaPredicted RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 TARBP2Q15633 366 aaKnown RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 ZC2HC1CQ53FD0 456 aaPredicted RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 OTUD6AQ7L8S5 288 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 MYCT1Q8N699 235 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 PXYLP1Q8TE99 480 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 PPP1R16BQ96T49 567 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 NIFKQ9BYG3 293 aaKnown RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 XPNPEP3Q9NQH7 507 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 SETD4Q9NVD3 440 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 ERAP1Q9NZ08 941 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 COQ9O75208 318 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 PARNO95453 639 aaKnown RBP11.38□□□□□ -0.59
USP39-210ENST00000459775 MYBP10242 640 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 RARBP10826 455 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 XRCC6P12956 609 aaKnown RBP eCLIP11.38□□□□□ -0.59
USP39-210ENST00000459775 HOXD8P13378 290 aaPredicted RBP11.38□□□□□ -0.59
USP39-210ENST00000459775 KIAA0753Q2KHM9 967 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 C4orf46Q504U0 113 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
USP39-210ENST00000459775 DHX40Q8IX18 779 aaKnown RBP11.38□□□□□ -0.59
USP39-210ENST00000459775 NELFCDQ8IXH7 590 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 AOPEPQ8N6M6 819 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 UNC93B1Q9H1C4 597 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 PDLIM7Q9NR12 457 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 NRBP2Q9NSY0 501 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 CTNND2Q9UQB3 1225 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 CFAP69A5D8W1 941 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
USP39-210ENST00000459775 FAM13AO94988 1023 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 GUCY2CP25092 1073 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 BMP8BP34820 402 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 POLGP54098 1239 aaPredicted RBP11.38□□□□□ -0.59
USP39-210ENST00000459775 KCNB1Q14721 858 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 EMC2Q15006 297 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 FAM26FQ5R3K3 315 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 CNNM4Q6P4Q7 775 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 VTI1AQ96AJ9 217 aa11.38□□□□□ -0.59
USP39-210ENST00000459775 FSD2A1L4K1 749 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 PRPF6O94906 941 aaKnown RBP11.37□□□□□ -0.59
USP39-210ENST00000459775 MYL1P05976 194 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 HOXD13P35453 343 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 CLCN3P51790 818 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 PEX3P56589 373 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 GJA9P57773 515 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
USP39-210ENST00000459775 IQCB1Q15051 598 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 KCNA10Q16322 511 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 ODR4Q5SWX8 454 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 MARCH8Q5T0T0 291 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 LHX8Q68G74 356 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 CCDC65Q8IXS2 484 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 METTL13Q8N6R0 699 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 ASAP3Q8TDY4 903 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 FIZ1Q96SL8 496 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 GTPBP4Q9BZE4 634 aaKnown RBP11.37□□□□□ -0.59
USP39-210ENST00000459775 POLR3FQ9H1D9 316 aaPredicted RBP11.37□□□□□ -0.59
USP39-210ENST00000459775 MRPL44Q9H9J2 332 aaKnown RBP11.37□□□□□ -0.59
USP39-210ENST00000459775 RMND1Q9NWS8 449 aa11.37□□□□□ -0.59
USP39-210ENST00000459775 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
USP39-210ENST00000459775 SLC16A4O15374 487 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 EVI5O60447 810 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP39-210ENST00000459775 F2P00734 622 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 KLRC1P26715 233 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 PEX19P40855 299 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 CPT1AP50416 773 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 TBC1D8BQ0IIM8 1120 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
USP39-210ENST00000459775 ADSSL1Q8N142 457 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 SCFD1Q8WVM8 642 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 LRRC27Q9C0I9 530 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 RNF208Q9H0X6 261 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
USP39-210ENST00000459775 ATP6V0A4Q9HBG4 840 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 PARVGQ9HBI0 331 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
USP39-210ENST00000459775 NRBP1Q9UHY1 535 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 CCDC169A6NNP5 214 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 TISP43B9A030 160 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 AP5Z1O43299 807 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 CSDE1O75534 798 aaKnown RBP11.36□□□□□ -0.59
USP39-210ENST00000459775 DGAT1O75907 488 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 ASGR1P07306 291 aa11.36□□□□□ -0.59
USP39-210ENST00000459775 SMIM10L2AP0DMW4 78 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms