RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU1-88P-201ENST00000459274 NRCAMQ92823 1304 aa6.41□□□□□ -1.38
RNU1-88P-201ENST00000459274 IGKV6D-21A0A0A0MT36 114 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 DENND3A2RUS2 1198 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SLC16A4O15374 487 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SEPT4O43236 478 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 CCP110O43303 1012 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 N4BP1O75113 896 aaKnown RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 MAFO75444 373 aaPredicted RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 MMP3P08254 477 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 CCDC172P0C7W6 258 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SRGAP2CP0DJJ0 459 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 HSPA6P17066 643 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SMPD1P17405 629 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 TRIM21P19474 475 aaKnown RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SFPQP23246 707 aaKnown RBP eCLIP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 KLRC1P26715 233 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 CDC25BP30305 580 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ZNF75DP51815 510 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ARHGAP1Q07960 439 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 PPFIA1Q13136 1202 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 MYBPC2Q14324 1141 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 LRRC41Q15345 812 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 FSCN1Q16658 493 aaKnown RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 KYAT1Q16773 422 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 HS1BP3Q53T59 392 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 HSP90AA4PQ58FG1 418 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ARSHQ5FYA8 562 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 TCP11X2Q5H9J9 407 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 FAM47CQ5HY64 1035 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 PRAMEF19Q5SWL8 479 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ANKRD40Q6AI12 368 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ANO5Q75V66 913 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 CACNA2D4Q7Z3S7 1137 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 RHPN2Q8IUC4 686 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SPC24Q8NBT2 197 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 CD99L2Q8TCZ2 262 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SPIRE2Q8WWL2 714 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 NLRP7Q8WX94 980 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 POMGNT1Q8WZA1 660 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 FNBP1Q96RU3 617 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 TUBGCP2Q9BSJ2 902 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 MTG1Q9BT17 334 aaPredicted RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SEZ6LQ9BYH1 1024 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 XPNPEP3Q9NQH7 507 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 SUCLA2Q9P2R7 463 aaPredicted RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ARMCX3Q9UH62 379 aaPredicted RBP6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 GJD2Q9UKL4 321 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 TRIM17Q9Y577 477 aa6.4□□□□□ -1.38
RNU1-88P-201ENST00000459274 ADGRA2Q96PE1 1338 aa6.4□□□□□ -1.39
RNU1-88P-201ENST00000459274 LRRC37A2A6NM11 1700 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 FRMD3A2A2Y4 597 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 C17orf102A2RUQ5 167 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 A6NJR5 290 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 INO80B-WBP1J3KQ70 363 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZBTB39O15060 712 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 SLC16A3O15427 465 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 CLDN3O15551 220 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 OFD1O75665 1012 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRPF6O94906 941 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NR3C1P04150 777 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 INSRRP14616 1297 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NMT1P30419 496 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 GRK4P32298 578 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NPTX2P47972 431 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF131P52739 623 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 PRKCZQ05513 592 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 MFSD10Q14728 455 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 PLCB4Q15147 1175 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 PCBP1Q15365 356 aaKnown RBP eCLIP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 SURF1Q15526 300 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCL14Q16627 93 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 MAN2A1Q16706 1144 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 UGCGQ16739 394 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 KIAA0753Q2KHM9 967 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 SLC9C1Q4G0N8 1177 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 SPECC1LQ69YQ0 1117 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 INTS8Q75QN2 995 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMC6Q7Z403 805 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 FRMD5Q7Z6J6 570 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 CNGA4Q8IV77 575 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 HACE1Q8IYU2 909 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 TXLNBQ8N3L3 684 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NME8Q8N427 588 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCDC155Q8N6L0 562 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 XXYLT1Q8NBI6 393 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 RNF149Q8NC42 400 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCDC112Q8NEF3 446 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 USP6NLQ92738 828 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 COPS5Q92905 334 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMEM143Q96AN5 459 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 CNOT6LQ96LI5 555 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NLRP4Q96MN2 994 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 GLT1D1Q96MS3 346 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 SH2D3AQ9BRG2 576 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 NTPCRQ9BSD7 190 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 MKNK1Q9BUB5 465 aa6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 GCOM2Q9BZD3 368 aaPredicted RBP6.39□□□□□ -1.39
RNU1-88P-201ENST00000459274 IMPG2Q9BZV3 1241 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms