RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TMEM161AQ9NX61 479 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 RWDD3Q9Y3V2 267 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 LINC01553A4QN01 128 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 PP2D1A8MPX8 630 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 C9IYK1 514 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 DGKIO75912 1065 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 CDC25AP30304 524 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 PTENP60484 403 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 ERVK-21P61565 698 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 PPP2R5AQ15172 486 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 HYIQ5T013 277 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 CABP7Q86V35 215 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 RASSF8Q8NHQ8 419 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 LINC01599Q8WXQ3 324 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 KIFAP3Q92845 792 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 PRDM12Q9H4Q4 367 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
CD28-203ENST00000458610 KCNG1Q9UIX4 513 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 CLIC4Q9Y696 253 aa17.92■□□□□ 0.46
CD28-203ENST00000458610 MORC2Q9Y6X9 1032 aaPredicted RBP17.92■□□□□ 0.46
CD28-203ENST00000458610 LCHNA4D1U4 455 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 MGEA5O60502 916 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 ERLIN2O94905 339 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 EOMESO95936 686 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 ZSCAN22P10073 491 aaPredicted RBP17.91■□□□□ 0.46
CD28-203ENST00000458610 FOSL2P15408 326 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 BTG3Q14201 252 aaPredicted RBP17.91■□□□□ 0.46
CD28-203ENST00000458610 ECM1Q16610 540 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 MAEAQ7L5Y9 396 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 IFNLR1Q8IU57 520 aaPredicted RBP17.91■□□□□ 0.46
CD28-203ENST00000458610 CMTR2Q8IYT2 770 aaKnown RBP17.91■□□□□ 0.46
CD28-203ENST00000458610 SPRYD3Q8NCJ5 442 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 MYLIPQ8WY64 445 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 RSPH1Q8WYR4 309 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 IFT74Q96LB3 600 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 MMTAG2Q9BU76 263 aaKnown RBP17.91■□□□□ 0.46
CD28-203ENST00000458610 TIPINQ9BVW5 301 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 TRAIPQ9BWF2 469 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 NFKBIZQ9BYH8 718 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 MICAL3Q7RTP6 2002 aa17.91■□□□□ 0.46
CD28-203ENST00000458610 A0A0U1RQF3 1178 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 E9PMD0 336 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 INO80B-WBP1J3KQ70 363 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 CSDE1O75534 798 aaKnown RBP17.9■□□□□ 0.46
CD28-203ENST00000458610 FGFR4P22455 802 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 GLRA2P23416 452 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 AXLP30530 894 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 TXLNAP40222 546 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 RAB27AP51159 221 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 CEBPZQ03701 1054 aaKnown RBP17.9■□□□□ 0.46
CD28-203ENST00000458610 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 PTPAQ15257 358 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 ATL3Q6DD88 541 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 TWF2Q6IBS0 349 aaKnown RBP17.9■□□□□ 0.46
CD28-203ENST00000458610 ZBTB8OSQ8IWT0 167 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 CRIPAKQ8N1N5 446 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 ZNF689Q96CS4 500 aaPredicted RBP17.9■□□□□ 0.46
CD28-203ENST00000458610 C2orf40Q9H1Z8 148 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 KCND2Q9NZV8 630 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 PIN4Q9Y237 131 aaKnown RBP17.9■□□□□ 0.46
CD28-203ENST00000458610 SRPRBQ9Y5M8 271 aaKnown RBP17.9■□□□□ 0.46
CD28-203ENST00000458610 ADGRA3Q8IWK6 1321 aa17.9■□□□□ 0.46
CD28-203ENST00000458610 LRRIQ4A6NIV6 560 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 GTPBP6O43824 516 aaPredicted RBP17.89■□□□□ 0.45
CD28-203ENST00000458610 IBSPP21815 317 aaPredicted RBP17.89■□□□□ 0.45
CD28-203ENST00000458610 CAPSQ13938 189 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 STK38Q15208 465 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 ECHDC2Q86YB7 292 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 ABI1Q8IZP0 508 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 DEPTORQ8TB45 409 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 ASAP3Q8TDY4 903 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 CCDC51Q96ER9 411 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 USP28Q96RU2 1077 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 CCSER1Q9C0I3 900 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 CERS4Q9HA82 394 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 AGPAT5Q9NUQ2 364 aa17.89■□□□□ 0.45
CD28-203ENST00000458610 F13A1P00488 732 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 RB1P06400 928 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 IGFBP4P22692 258 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 MARCKSP29966 332 aaPredicted RBP17.88■□□□□ 0.45
CD28-203ENST00000458610 NAMPTP43490 491 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 NASPP49321 788 aaPredicted RBP17.88■□□□□ 0.45
CD28-203ENST00000458610 GRB10Q13322 594 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 TMEM192Q8IY95 271 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 SYT2Q8N9I0 419 aaPredicted RBP17.88■□□□□ 0.45
CD28-203ENST00000458610 KRI1Q8N9T8 703 aaKnown RBP17.88■□□□□ 0.45
CD28-203ENST00000458610 CNNM3Q8NE01 707 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 DRC1Q96MC2 740 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 PNMA5Q96PV4 448 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 C17orf75Q9HAS0 396 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 GPRC5CQ9NQ84 441 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 AAASQ9NRG9 546 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 CFAP45Q9UL16 551 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 SIP14410 1827 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 TTC3P53804 2025 aa17.88■□□□□ 0.45
CD28-203ENST00000458610 ZNF623O75123 536 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms