RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 S1PR5Q9H228 398 aa12.67□□□□□ -0.38
RPSA-204ENST00000458478 SLC37A4O43826 429 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 MAFO75444 373 aaPredicted RBP12.66□□□□□ -0.38
RPSA-204ENST00000458478 DNM2P50570 870 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 PSMC5P62195 406 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 KRT17Q04695 432 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 SCRN1Q12765 414 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
RPSA-204ENST00000458478 LETM2Q2VYF4 491 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 HFE2Q6ZVN8 426 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 RHPN2Q8IUC4 686 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
RPSA-204ENST00000458478 LRRC43Q8N309 656 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 SUSD6Q92537 303 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 EDAQ92838 391 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 PHF7Q9BWX1 381 aaPredicted RBP12.66□□□□□ -0.38
RPSA-204ENST00000458478 NGRNQ9NPE2 291 aaKnown RBP12.66□□□□□ -0.38
RPSA-204ENST00000458478 ENTPD7Q9NQZ7 604 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 CHST12Q9NRB3 414 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 GJB4Q9NTQ9 266 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 SPG21Q9NZD8 308 aa12.66□□□□□ -0.38
RPSA-204ENST00000458478 SUCLA2Q9P2R7 463 aaPredicted RBP12.66□□□□□ -0.38
RPSA-204ENST00000458478 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 NT5C1B-RDH14C9J2C7 533 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 TECP42680 631 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 PHKA2P46019 1235 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 ANKRD54Q6NXT1 300 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 LLGL2Q6P1M3 1020 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 SYCE2Q6PIF2 218 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 SLC39A11Q8N1S5 342 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
RPSA-204ENST00000458478 RPGRIP1Q96KN7 1286 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 KCNMB3Q9NPA1 279 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 VAV3Q9UKW4 847 aa12.65□□□□□ -0.38
RPSA-204ENST00000458478 WDFY4Q6ZS81 3184 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 PPM1AP35813 382 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
RPSA-204ENST00000458478 ALDH7A1P49419 539 aaKnown RBP12.64□□□□□ -0.39
RPSA-204ENST00000458478 NPEPPSP55786 919 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 BCAR1P56945 870 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 PPP2R5CQ13362 524 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 LONRF3Q496Y0 759 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 PPP4R3AQ6IN85 833 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 ZNF410Q86VK4 478 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 MRPL43Q8N983 215 aaKnown RBP12.64□□□□□ -0.39
RPSA-204ENST00000458478 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 HAS1Q92839 578 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 LPPQ93052 612 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 INO80BQ9C086 356 aaPredicted RBP12.64□□□□□ -0.39
RPSA-204ENST00000458478 SLKQ9H2G2 1235 aaPredicted RBP12.64□□□□□ -0.39
RPSA-204ENST00000458478 IFT122Q9HBG6 1241 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 CYP26B1Q9NR63 512 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 WRAP73Q9P2S5 460 aaPredicted RBP12.64□□□□□ -0.39
RPSA-204ENST00000458478 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
RPSA-204ENST00000458478 C2orf71A6NGG8 1288 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 CCNT1O60563 726 aaKnown RBP12.63□□□□□ -0.39
RPSA-204ENST00000458478 PFKFB2O60825 505 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 CDKL5O76039 1030 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 CXCL14O95715 111 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 P4HBP07237 508 aaKnown RBP12.63□□□□□ -0.39
RPSA-204ENST00000458478 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 SFPQP23246 707 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPSA-204ENST00000458478 ZXDAP98168 799 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 EARS2Q5JPH6 523 aaKnown RBP12.63□□□□□ -0.39
RPSA-204ENST00000458478 TWF2Q6IBS0 349 aaKnown RBP12.63□□□□□ -0.39
RPSA-204ENST00000458478 TRIM67Q6ZTA4 783 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 NEK8Q86SG6 692 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 MFSD14AQ96MC6 490 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 FBXL18Q96ME1 805 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 NLRP4Q96MN2 994 aa12.63□□□□□ -0.39
RPSA-204ENST00000458478 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
RPSA-204ENST00000458478 PIN4Q9Y237 131 aaKnown RBP12.63□□□□□ -0.39
RPSA-204ENST00000458478 MUC6Q6W4X9 2439 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 TECTAO75443 2155 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 DKC1O60832 514 aaKnown RBP eCLIP12.62□□□□□ -0.39not detected■■■■■ 174.2
RPSA-204ENST00000458478 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
RPSA-204ENST00000458478 ZNF623O75123 536 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 OFD1O75665 1012 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 SKIP12755 728 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
RPSA-204ENST00000458478 XBP1P17861 261 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
RPSA-204ENST00000458478 EPHA7Q15375 998 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 CATSPER4Q7RTX7 472 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 BMP8AQ7Z5Y6 402 aa12.62□□□□□ -0.39
RPSA-204ENST00000458478 ALYREFQ86V81 257 aaKnown RBP12.62□□□□□ -0.39
RPSA-204ENST00000458478 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms