RNA–Protein interactions for RNA: ENST00000458291.6

CAGE1-205, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-205ENST00000458291 ADAM9Q13443 819 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 RPS6KA1Q15418 735 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 ASIC2Q16515 512 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 KIAA0753Q2KHM9 967 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 PNMA8AQ86V59 439 aaPredicted RBP6.42□□□□□ -1.38
CAGE1-205ENST00000458291 LRRC57Q8N9N7 239 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 ARMC2Q8NEN0 867 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 CCHCR1Q8TD31 782 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 FAM20AQ96MK3 541 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 MBOAT7Q96N66 472 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 ARMCX3Q9UH62 379 aaPredicted RBP6.42□□□□□ -1.38
CAGE1-205ENST00000458291 DNM3Q9UQ16 869 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 TRAF3IP3Q9Y228 551 aa6.42□□□□□ -1.38
CAGE1-205ENST00000458291 CFAP73A6NFT4 308 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PDXKO00764 312 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SLC16A3O15427 465 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 CEP104O60308 925 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 CAND2O75155 1236 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 CDC25CP30307 473 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 POLR2FP61218 127 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 BIRC2Q13490 618 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ZNF268Q14587 947 aaPredicted RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 CLUL1Q15846 466 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 AOC3Q16853 763 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 GRIPAP1Q4V328 841 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 MIS18BP1Q6P0N0 1132 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 TBC1D1Q86TI0 1168 aaPredicted RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 GPBP1Q86WP2 473 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 GPC2Q8N158 579 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ANKS4BQ8N8V4 417 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 GLIS3Q8NEA6 775 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ATP8B4Q8TF62 1192 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 TEKT1Q969V4 418 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 MKL1Q969V6 931 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PBKQ96KB5 322 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SPAG5Q96R06 1193 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 LSM14BQ9BX40 385 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 EPB41L4BQ9H329 900 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KANSL2Q9H9L4 492 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KIF9Q9HAQ2 790 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ABCF3Q9NUQ8 709 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 AMACRQ9UHK6 382 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 INTUQ9ULD6 942 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KIAA1024Q9UPX6 916 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SLX4Q8IY92 1834 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ZNF541Q9H0D2 1346 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ARFGEF1Q9Y6D6 1849 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 GTPBP10A4D1E9 387 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KLHL33A6NCF5 533 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 TTI1O43156 1089 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PPFIA2O75334 1257 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 XRCC5P13010 732 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 ITGA4P13612 1032 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 RPA1P27694 616 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 MMP13P45452 471 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 NCALDP61601 193 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KCNJ2P63252 427 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 GTF2IP78347 998 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 DHX9Q08211 1270 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PICALMQ13492 652 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 RAPGEF1Q13905 1077 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PTPROQ16827 1216 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 FAM133BQ5BKY9 247 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KCNK18Q7Z418 384 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 LDHDQ86WU2 507 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 LRRC34Q8IZ02 419 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SYCE1Q8N0S2 351 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 METTL13Q8N6R0 699 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SUPT20HQ8NEM7 779 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 RNF217Q8TC41 542 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 MRIQ9BWK5 157 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 CELF4Q9BZC1 486 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 KCTD10Q9H3F6 313 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SLC5A4Q9NY91 659 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
CAGE1-205ENST00000458291 NYAP2Q9P242 653 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 SYNPO2Q9UMS6 1093 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PCDHA2Q9Y5H9 948 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 PCDHA1Q9Y5I3 950 aa6.41□□□□□ -1.38
CAGE1-205ENST00000458291 CCDC188H7C350 402 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 RIMBP2O15034 1052 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 NPM3O75607 178 aaKnown RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 RAD17O75943 681 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 OAS1P00973 400 aaKnown RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 AFPP02771 609 aaKnown RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 SHBGP04278 402 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 RARAP10276 462 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 NQO1P15559 274 aaKnown RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 GAP43P17677 238 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 CYP11B2P19099 503 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 NR2F2P24468 414 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 ALDH5A1P51649 535 aaPredicted RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 EIF3BP55884 814 aaKnown RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 SARNPP82979 210 aaKnown RBP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 SF3A3Q12874 501 aaKnown RBP eCLIP6.4□□□□□ -1.38
CAGE1-205ENST00000458291 SLMAPQ14BN4 828 aa6.4□□□□□ -1.38
CAGE1-205ENST00000458291 LRRC41Q15345 812 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms