RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 DOCK3Q8IZD9 2030 aa9.82□□□□□ -0.84
CDC42EP3-204ENST00000457889 MYH11P35749 1972 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 K7ENM7 598 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 CETN3O15182 167 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 AP5Z1O43299 807 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 MAFO75444 373 aaPredicted RBP9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 LGALS2P05162 132 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 PTMAP06454 111 aaKnown RBP9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 MMP3P08254 477 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 ATP1A3P13637 1013 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 ATP4AP20648 1035 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 CYP2B6P20813 491 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 PBX2P40425 430 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 NAMPTP43490 491 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 PMS1P54277 932 aaKnown RBP9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 NKX3-2P78367 333 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 GTF2BQ00403 316 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 MXD4Q14582 209 aaPredicted RBP9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 PLCB4Q15147 1175 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 MTERF2Q49AM1 385 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 IER5Q5VY09 327 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 LRRC55Q6ZSA7 311 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 FILIP1Q7Z7B0 1213 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 SLC9A9Q8IVB4 645 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 AFG1LQ8WV93 481 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 HPS3Q969F9 1004 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 IQCDQ96DY2 449 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 ERO1AQ96HE7 468 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 ACCSQ96QU6 501 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 CEP89Q96ST8 783 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 MKNK1Q9BUB5 465 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 SRRTQ9BXP5 876 aaKnown RBP9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 XPO4Q9C0E2 1151 aaKnown RBP9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 AP5M1Q9H0R1 490 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 GBP3Q9H0R5 595 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 RNF186Q9NXI6 227 aa9.81□□□□□ -0.84
CDC42EP3-204ENST00000457889 IGKV6-21A0A0C4DH24 114 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 TRIM49BA6NDI0 452 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 RRN3P2A6NIE6 340 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 LGALS16A8MUM7 142 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 KIAA0391O15091 583 aaKnown RBP9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 ASAP2O43150 1006 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 DUSP11O75319 330 aaKnown RBP9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 MYBP10242 640 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 CYBAP13498 195 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 ARL2P36404 184 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 NPTX2P47972 431 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 VEGFBP49765 207 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 FLT3LGP49771 235 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 DNM2P50570 870 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 CASP5P51878 434 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 EFNA5P52803 228 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 TRIM14Q14142 442 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 KRT31Q15323 416 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 LRRC41Q15345 812 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 HAUS6Q7Z4H7 955 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 MAP4K3Q8IVH8 894 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 DRC7Q8IY82 874 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 PXYLP1Q8TE99 480 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 COPS5Q92905 334 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 KATNAL1Q9BW62 490 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 POLR3FQ9H1D9 316 aaPredicted RBP9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 SPC25Q9HBM1 224 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 METTL14Q9HCE5 456 aaKnown RBP9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 KMT5AQ9NQR1 393 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 XPNPEP1Q9NQW7 623 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 FLRT1Q9NZU1 646 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 TBC1D7Q9P0N9 293 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 ARHGAP28Q9P2N2 729 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 SRRDQ9UH36 339 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 ITIH6Q6UXX5 1313 aa9.8□□□□□ -0.84
CDC42EP3-204ENST00000457889 A0A1W2PQC6 194 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TMEM150BA6NC51 233 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 H3BRB1 525 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 N4BP3O15049 544 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 MAPK13O15264 365 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 SEPT4O43236 478 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 NRDCO43847 1150 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 ZEB2O60315 1214 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 SORBS3O60504 671 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 F2P00734 622 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 NR3C1P04150 777 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 NR2F2P24468 414 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TMOD1P28289 359 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 CTGFP29279 349 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 NMT1P30419 496 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 CYP2C19P33261 490 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 PSEN2P49810 448 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 COPB1P53618 953 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 PEX3P56589 373 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 CDC42EP1Q00587 391 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 MAP2K1Q02750 393 aaPredicted RBP9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 POU5F1BQ06416 359 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 ENPEPQ07075 957 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 TFDP1Q14186 410 aa9.79□□□□□ -0.84
CDC42EP3-204ENST00000457889 NR1I3Q14994 352 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms