RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 F13A1P00488 732 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 CA3P07451 260 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 SKIP12755 728 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 MYOGP15173 224 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 SLC39A14Q15043 492 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 PPP2R5AQ15172 486 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
C9orf139-201ENST00000457302 Q7L0L9 218 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 TMCO2Q7Z6W1 182 aaPredicted RBP13.65□□□□□ -0.22
C9orf139-201ENST00000457302 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 TMEM40Q8WWA1 233 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
C9orf139-201ENST00000457302 PLIN2Q99541 437 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 POLR3FQ9H1D9 316 aaPredicted RBP13.65□□□□□ -0.22
C9orf139-201ENST00000457302 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
C9orf139-201ENST00000457302 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
C9orf139-201ENST00000457302 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
C9orf139-201ENST00000457302 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 ARL2P36404 184 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
C9orf139-201ENST00000457302 ECM1Q16610 540 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
C9orf139-201ENST00000457302 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
C9orf139-201ENST00000457302 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
C9orf139-201ENST00000457302 FIBCD1Q8N539 461 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
C9orf139-201ENST00000457302 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 XPNPEP1Q9NQW7 623 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
C9orf139-201ENST00000457302 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
C9orf139-201ENST00000457302 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 SPTLC2O15270 562 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 HOXA2O43364 376 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 CSDE1O75534 798 aaKnown RBP13.63□□□□□ -0.23
C9orf139-201ENST00000457302 FGFR4P22455 802 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 AXLP30530 894 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
C9orf139-201ENST00000457302 PTPAQ15257 358 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 HYIQ5T013 277 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 TWF2Q6IBS0 349 aaKnown RBP13.63□□□□□ -0.23
C9orf139-201ENST00000457302 ABI1Q8IZP0 508 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 DEPTORQ8TB45 409 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 TGS1Q96RS0 853 aaKnown RBP13.63□□□□□ -0.23
C9orf139-201ENST00000457302 MMTAG2Q9BU76 263 aaKnown RBP13.63□□□□□ -0.23
C9orf139-201ENST00000457302 TIPINQ9BVW5 301 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 CSRNP2Q9H175 543 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 IFT122Q9HBG6 1241 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 PIN4Q9Y237 131 aaKnown RBP13.63□□□□□ -0.23
C9orf139-201ENST00000457302 MYH11P35749 1972 aa13.63□□□□□ -0.23
C9orf139-201ENST00000457302 EOMESO95936 686 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 NASPP49321 788 aaPredicted RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 PTENP60484 403 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 SPOUT1Q5T280 376 aaKnown RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 RRAGBQ5VZM2 374 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 SYT2Q8N9I0 419 aaPredicted RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 PGBD4Q96DM1 585 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 CDX2Q99626 313 aaPredicted RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 TTYH1Q9H313 450 aaPredicted RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 ELAC1Q9H777 363 aaKnown RBP13.62□□□□□ -0.23
C9orf139-201ENST00000457302 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 KCND2Q9NZV8 630 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
C9orf139-201ENST00000457302 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 C9IYK1 514 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
C9orf139-201ENST00000457302 MGEA5O60502 916 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 PPP6R2O75170 966 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 DGKIO75912 1065 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 YEATS4O95619 227 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
C9orf139-201ENST00000457302 GLRA2P23416 452 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 DDIT3P35638 169 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 NAMPTP43490 491 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 RAB27AP51159 221 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 SMTNP53814 917 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 FAM189BP81408 668 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 TAP1Q03518 808 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 GRB10Q13322 594 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 CAPSQ13938 189 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 DHX8Q14562 1220 aaKnown RBP13.61□□□□□ -0.23
C9orf139-201ENST00000457302 DSC3Q14574 896 aa13.61□□□□□ -0.23
C9orf139-201ENST00000457302 GRIN2CQ14957 1233 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms