RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 IFNLR1Q8IU57 520 aaPredicted RBP15.67■□□□□ 0.1
SMPD4-215ENST00000457039 TDHQ8IZJ6 230 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 PDILTQ8N807 584 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 RNF149Q8NC42 400 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 KIFAP3Q92845 792 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 APBB2Q92870 758 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 NLRP4Q96MN2 994 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 GCOM2Q9BZD3 368 aaPredicted RBP15.67■□□□□ 0.1
SMPD4-215ENST00000457039 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 FAM13BQ9NYF5 915 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 CXXC1Q9P0U4 656 aaPredicted RBP15.67■□□□□ 0.1
SMPD4-215ENST00000457039 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 HPSEQ9Y251 543 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 SRGAP2CP0DJJ0 459 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 ACTN1P12814 892 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 PFKFB1P16118 471 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 STAT6P42226 847 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 PTENP60484 403 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 PAK2Q13177 524 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 GPBP1Q86WP2 473 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 NFKBIZQ9BYH8 718 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 TMX1Q9H3N1 280 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 ST3GAL5Q9UNP4 418 aa15.66■□□□□ 0.1
SMPD4-215ENST00000457039 NPHP3-ACAD11A0A0J9YXS1 232 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 ABHD14A-ACY1A0A1B0GW23 586 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 GPR182O15218 404 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 CSDE1O75534 798 aaKnown RBP15.65■□□□□ 0.1
SMPD4-215ENST00000457039 IKBKEQ14164 716 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 TFDP1Q14186 410 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 DHX8Q14562 1220 aaKnown RBP15.65■□□□□ 0.1
SMPD4-215ENST00000457039 CDCA2Q69YH5 1023 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-215ENST00000457039 FAM43BQ6ZT52 329 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-215ENST00000457039 SRGAP1Q7Z6B7 1085 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 IQUBQ8NA54 791 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 LINC01599Q8WXQ3 324 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 SCLT1Q96NL6 688 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 INO80BQ9C086 356 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-215ENST00000457039 CUEDC2Q9H467 287 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 MINDY3Q9H8M7 445 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 KBTBD4Q9NVX7 518 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 KCNH3Q9ULD8 1083 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 LAMA3Q16787 3333 aa15.65■□□□□ 0.1
SMPD4-215ENST00000457039 LAMA2P24043 3122 aaKnown RBP15.65■□□□□ 0.1
SMPD4-215ENST00000457039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-215ENST00000457039 MYMKA6NI61 221 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 POLR2DO15514 142 aaKnown RBP15.64■□□□□ 0.09
SMPD4-215ENST00000457039 EFCAB14O75071 495 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 NAMPTP43490 491 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 PHKA2P46019 1235 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 ZNF131P52739 623 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 WDR5P61964 334 aaKnown RBP15.64■□□□□ 0.09
SMPD4-215ENST00000457039 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-215ENST00000457039 RAD51AP2Q09MP3 1159 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 NFX1Q12986 1120 aaKnown RBP15.64■□□□□ 0.09
SMPD4-215ENST00000457039 GIT2Q14161 759 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 ODR4Q5SWX8 454 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 SV2BQ7L1I2 683 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 TMEM87AQ8NBN3 555 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 DHX58Q96C10 678 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 RNPC3Q96LT9 517 aaKnown RBP15.64■□□□□ 0.09
SMPD4-215ENST00000457039 REEP2Q9BRK0 252 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 FTHL17Q9BXU8 183 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 GOLPH3LQ9H4A5 285 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 C17orf75Q9HAS0 396 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 ODF2LQ9ULJ1 636 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 ADGRA3Q8IWK6 1321 aa15.64■□□□□ 0.09
SMPD4-215ENST00000457039 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 MGEA5O60502 916 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 FGFR4P22455 802 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 NDUFA8P51970 172 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 MBTD1Q05BQ5 628 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 DSC3Q14574 896 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 PPP2R5AQ15172 486 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.63■□□□□ 0.09
SMPD4-215ENST00000457039 CLEC17AQ6ZS10 378 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 RTN4RL1Q86UN2 441 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-215ENST00000457039 FSIP1Q8NA03 581 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 MRPS27Q92552 414 aaKnown RBP15.63■□□□□ 0.09
SMPD4-215ENST00000457039 DNAJC19Q96DA6 116 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 PYM1Q9BRP8 204 aaKnown RBP15.63■□□□□ 0.09
SMPD4-215ENST00000457039 TSPYL2Q9H2G4 693 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-215ENST00000457039 MTIF3Q9H2K0 278 aaKnown RBP15.63■□□□□ 0.09
SMPD4-215ENST00000457039 TNMDQ9H2S6 317 aa15.63■□□□□ 0.09
SMPD4-215ENST00000457039 LRRIQ4A6NIV6 560 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 SFI1A8K8P3 1242 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 ZBBXA8MT70 800 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 ENPP3O14638 875 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 ACTN4O43707 911 aaKnown RBP15.62■□□□□ 0.09
SMPD4-215ENST00000457039 PLS3P13797 630 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 SFPQP23246 707 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMPD4-215ENST00000457039 NPTX2P47972 431 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 PEX3P56589 373 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 DEFB103AP81534 67 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 PCBP1Q15365 356 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMPD4-215ENST00000457039 AMHR2Q16671 573 aa15.62■□□□□ 0.09
SMPD4-215ENST00000457039 SPIRE2Q8WWL2 714 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms