RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 WDR81Q562E7 1941 aa26.29■■□□□ 1.8
PTPRA-208ENST00000455631 hCG_1984214I3L0E3 225 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 SLC27A2O14975 620 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 DARSP14868 501 aaKnown RBP26.28■■□□□ 1.8
PTPRA-208ENST00000455631 GPC3P51654 580 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 SETQ01105 290 aaPredicted RBP26.28■■□□□ 1.8
PTPRA-208ENST00000455631 TDGQ13569 410 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 OTOP3Q7RTS5 596 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 SIX5Q8N196 739 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 ZNF710Q8N1W2 664 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 ZNF713Q8N859 430 aaPredicted RBP26.28■■□□□ 1.8
PTPRA-208ENST00000455631 RTP3Q9BQQ7 232 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 BARHL2Q9NY43 387 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 DUSP12Q9UNI6 340 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 IRAK3Q9Y616 596 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 V9GY48 417 aaPredicted RBP26.28■■□□□ 1.8
PTPRA-208ENST00000455631 GVINP1Q7Z2Y8 2422 aa26.28■■□□□ 1.8
PTPRA-208ENST00000455631 POLGP54098 1239 aaPredicted RBP26.27■■□□□ 1.8
PTPRA-208ENST00000455631 APOA5Q6Q788 366 aa26.27■■□□□ 1.8
PTPRA-208ENST00000455631 DDX53Q86TM3 631 aaKnown RBP26.27■■□□□ 1.8
PTPRA-208ENST00000455631 DTWD2Q8NBA8 298 aa26.27■■□□□ 1.8
PTPRA-208ENST00000455631 NLRP7Q8WX94 980 aa26.27■■□□□ 1.8
PTPRA-208ENST00000455631 C2orf16Q68DN1 1984 aa26.27■■□□□ 1.8
PTPRA-208ENST00000455631 RTN1Q16799 776 aa26.26■■□□□ 1.79
PTPRA-208ENST00000455631 GPR149Q86SP6 731 aa26.26■■□□□ 1.79
PTPRA-208ENST00000455631 PPFIBP1Q86W92 1011 aa26.26■■□□□ 1.79
PTPRA-208ENST00000455631 KCNG4Q8TDN1 519 aa26.26■■□□□ 1.79
PTPRA-208ENST00000455631 IGSF21Q96ID5 467 aa26.26■■□□□ 1.79
PTPRA-208ENST00000455631 CSDE1O75534 798 aaKnown RBP26.25■■□□□ 1.79
PTPRA-208ENST00000455631 OATP04181 439 aa26.25■■□□□ 1.79
PTPRA-208ENST00000455631 CYP3A4P08684 503 aa26.25■■□□□ 1.79
PTPRA-208ENST00000455631 FUT2Q10981 343 aa26.25■■□□□ 1.79
PTPRA-208ENST00000455631 BCL7CQ8WUZ0 217 aaPredicted RBP26.25■■□□□ 1.79
PTPRA-208ENST00000455631 CRYGNQ8WXF5 182 aa26.25■■□□□ 1.79
PTPRA-208ENST00000455631 KCNK12Q9HB15 430 aa26.25■■□□□ 1.79
PTPRA-208ENST00000455631 PRKCEQ02156 737 aa26.24■■□□□ 1.79
PTPRA-208ENST00000455631 LONRF3Q496Y0 759 aa26.24■■□□□ 1.79
PTPRA-208ENST00000455631 CREB3L3Q68CJ9 461 aa26.24■■□□□ 1.79
PTPRA-208ENST00000455631 LPPQ93052 612 aa26.24■■□□□ 1.79
PTPRA-208ENST00000455631 LSG1Q9H089 658 aaKnown RBP26.24■■□□□ 1.79
PTPRA-208ENST00000455631 INPP5FQ9Y2H2 1132 aa26.24■■□□□ 1.79
PTPRA-208ENST00000455631 CARNS1A5YM72 827 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 PHKA2P46019 1235 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 PTPN14Q15678 1187 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 PRR16Q569H4 304 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 TWF2Q6IBS0 349 aaKnown RBP26.23■■□□□ 1.79
PTPRA-208ENST00000455631 RSPH1Q8WYR4 309 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 GBP3Q9H0R5 595 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 NRDE2Q9H7Z3 1164 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 NRBP2Q9NSY0 501 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 TBC1D13Q9NVG8 400 aa26.23■■□□□ 1.79
PTPRA-208ENST00000455631 WDR64B1ANS9 1081 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 STK25O00506 426 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 ZBTB43O43298 467 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 ZNF862O60290 1169 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 GALTP07902 379 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 RFX1P22670 979 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 RNASELQ05823 741 aaKnown RBP26.22■■□□□ 1.79
PTPRA-208ENST00000455631 TBC1D8BQ0IIM8 1120 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 GLB1LQ6UWU2 654 aa26.22■■□□□ 1.79
PTPRA-208ENST00000455631 NARSO43776 548 aaKnown RBP26.21■■□□□ 1.79
PTPRA-208ENST00000455631 LMNAP02545 664 aaKnown RBP26.21■■□□□ 1.79
PTPRA-208ENST00000455631 KLRC2P26717 231 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 LETM2Q2VYF4 491 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 NOMO2Q5JPE7 1267 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 RMDN1Q96DB5 314 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 VN1R3Q9BXE9 311 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 EMILIN2Q9BXX0 1053 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 GCOM2Q9BZD3 368 aaPredicted RBP26.21■■□□□ 1.79
PTPRA-208ENST00000455631 CHST12Q9NRB3 414 aa26.21■■□□□ 1.79
PTPRA-208ENST00000455631 GOLGA8AA7E2F4 631 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 GOLGA8BA8MQT2 603 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 SSBP05455 408 aaKnown RBP eCLIP26.2■■□□□ 1.78
PTPRA-208ENST00000455631 CFHP08603 1231 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 CLCN4P51793 760 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 TCEANC2Q96MN5 208 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 KLHL5Q96PQ7 755 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 DISC1Q9NRI5 854 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 IGSF9Q9P2J2 1179 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 DNAJB4Q9UDY4 337 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 BRPF3Q9ULD4 1205 aa26.2■■□□□ 1.78
PTPRA-208ENST00000455631 PIN4Q9Y237 131 aaKnown RBP26.2■■□□□ 1.78
PTPRA-208ENST00000455631 MED19A0JLT2 244 aaPredicted RBP26.19■■□□□ 1.78
PTPRA-208ENST00000455631 MEIS3P2A8K0S8 358 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 SKIP12755 728 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 SFPQP23246 707 aaKnown RBP eCLIP26.19■■□□□ 1.78
PTPRA-208ENST00000455631 SLC11A1P49279 550 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 DRP2Q13474 957 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 UGCGQ16739 394 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 REXO1Q8N1G1 1221 aaKnown RBP26.19■■□□□ 1.78
PTPRA-208ENST00000455631 SEMA4AQ9H3S1 761 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 CACNA1AO00555 2505 aa26.19■■□□□ 1.78
PTPRA-208ENST00000455631 ADAMTS3O15072 1205 aa26.18■■□□□ 1.78
PTPRA-208ENST00000455631 CHMP2AO43633 222 aa26.18■■□□□ 1.78
PTPRA-208ENST00000455631 CNPP09543 421 aaKnown RBP26.18■■□□□ 1.78
PTPRA-208ENST00000455631 NECTIN1Q15223 517 aa26.18■■□□□ 1.78
PTPRA-208ENST00000455631 C15orf39Q6ZRI6 1047 aa26.18■■□□□ 1.78
PTPRA-208ENST00000455631 DGLUCYQ7Z3D6 616 aa26.18■■□□□ 1.78
PTPRA-208ENST00000455631 KIAA2013Q8IYS2 634 aa26.18■■□□□ 1.78
PTPRA-208ENST00000455631 TRAIPQ9BWF2 469 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms