RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 FGFR4P22455 802 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 KRT85P78386 507 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 CAPSQ13938 189 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 ARSHQ5FYA8 562 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 FAM102BQ5T8I3 360 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 PHOSPHO2Q8TCD6 241 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 LEO1Q8WVC0 666 aaPredicted RBP16.31■□□□□ 0.2
CLCN1-203ENST00000455478 LINC01599Q8WXQ3 324 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 RAD54LQ92698 747 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 MINDY3Q9H8M7 445 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 TTC3P53804 2025 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 A0A087X0B3 334 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 MGEA5O60502 916 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 KCNJ6P48051 423 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 ME1P48163 572 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 PTENP60484 403 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 SMAD3P84022 425 aaKnown RBP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 POU5F1BQ06416 359 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 MAPK7Q13164 816 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 MCM6Q14566 821 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 DSC3Q14574 896 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 NAALADL2Q58DX5 795 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 ODR4Q5SWX8 454 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 FAM43BQ6ZT52 329 aaPredicted RBP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 SRGAP1Q7Z6B7 1085 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 TMCO2Q7Z6W1 182 aaPredicted RBP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 DAW1Q8N136 415 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 BSNDQ8WZ55 320 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 LRCH3Q96II8 777 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 FTHL17Q9BXU8 183 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 PANK2Q9BZ23 570 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 INO80BQ9C086 356 aaPredicted RBP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
CLCN1-203ENST00000455478 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
CLCN1-203ENST00000455478 GUCY2CP25092 1073 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 TXLNAP40222 546 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLCN1-203ENST00000455478 TFDP1Q14186 410 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 RRAGBQ5VZM2 374 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 IFNLR1Q8IU57 520 aaPredicted RBP16.29■□□□□ 0.2
CLCN1-203ENST00000455478 HERC6Q8IVU3 1022 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 KIFAP3Q92845 792 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
CLCN1-203ENST00000455478 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
CLCN1-203ENST00000455478 GBF1Q92538 1859 aa16.29■□□□□ 0.2
CLCN1-203ENST00000455478 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 HIP1RO75146 1068 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 AMHP03971 560 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 PBX2P40425 430 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 PHKA2P46019 1235 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 RABGGTBP53611 331 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
CLCN1-203ENST00000455478 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
CLCN1-203ENST00000455478 TOP1MTQ969P6 601 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 ADAM2Q99965 735 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 NFKBIZQ9BYH8 718 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
CLCN1-203ENST00000455478 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 KCND2Q9NZV8 630 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 STK17AQ9UEE5 414 aa16.28■□□□□ 0.2
CLCN1-203ENST00000455478 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLCN1-203ENST00000455478 FAM189BP81408 668 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 RESP18Q5W5W9 173 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 CATSPER4Q7RTX7 472 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 GPBP1Q86WP2 473 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 PDILTQ8N807 584 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 TIPINQ9BVW5 301 aa16.27■□□□□ 0.2
CLCN1-203ENST00000455478 MYH11P35749 1972 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 SZT2Q5T011 3432 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 LRRIQ4A6NIV6 560 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 SFI1A8K8P3 1242 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 C9IYK1 514 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 GJB5O95377 273 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 MYOGP15173 224 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 HOXA11P31270 313 aaPredicted RBP16.26■□□□□ 0.19
CLCN1-203ENST00000455478 NAMPTP43490 491 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 MBTD1Q05BQ5 628 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 E2F4Q16254 413 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 CDCA2Q69YH5 1023 aaPredicted RBP16.26■□□□□ 0.19
CLCN1-203ENST00000455478 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 FAM117BQ6P1L5 589 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 IFT74Q96LB3 600 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 GDPD2Q9HCC8 539 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 CHST12Q9NRB3 414 aa16.26■□□□□ 0.19
CLCN1-203ENST00000455478 YBX2Q9Y2T7 364 aaKnown RBP16.26■□□□□ 0.19
CLCN1-203ENST00000455478 PCDHA11Q9Y5I1 949 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms