RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 AP3B2Q13367 1082 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 GPR158Q5T848 1215 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 PIK3R6Q5UE93 754 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 CYB5R4Q7L1T6 521 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ADAT2Q7Z6V5 191 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 RALYLQ86SE5 291 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 CPA6Q8N4T0 437 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 GSTCDQ8NEC7 633 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 IGDCC4Q8TDY8 1250 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 KIFC2Q96AC6 838 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ELMO3Q96BJ8 720 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ABHD17AQ96GS6 310 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 PRMT6Q96LA8 375 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 POP1Q99575 1024 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 LRRC2Q9BYS8 371 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 AGXT2Q9BYV1 514 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC13A1Q9BZW2 595 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 KRT23Q9C075 422 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 CRTAC1Q9NQ79 661 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDX4Q9NQI0 724 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 NDFIP2Q9NV92 336 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ARPP21Q9UBL0 812 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 KLF15Q9UIH9 416 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 HDAC9Q9UKV0 1011 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 TPCN1Q9ULQ1 816 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 PHTF1Q9UMS5 762 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 MORC2Q9Y6X9 1032 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 NAV1Q8NEY1 1877 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 FLT1P17948 1338 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 NEDD4P46934 1319 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 TIAM2Q8IVF5 1701 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 PMM2O15305 246 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 PIP5K1CO60331 668 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 PRDM1O75626 825 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 C6orf222P0C671 652 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 VCAM1P19320 739 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 FGFR3P22607 806 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 RPS12P25398 132 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDIT3P35638 169 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 GRIA2P42262 883 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 SARSP49591 514 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 PMS1P54277 932 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 GJA9P57773 515 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 RBM10P98175 930 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 NFIAQ12857 509 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 KCTD2Q14681 263 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC9A5Q14940 896 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DLGAP5Q15398 846 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 ME3Q16798 604 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 RRP12Q5JTH9 1297 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 TDRD10Q5VZ19 366 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 EPM2AIP1Q7L775 607 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 PDZD3Q86UT5 571 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZFPM1Q8IX07 1006 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 FAM186BQ8IYM0 893 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 NECAB1Q8N987 351 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 GPBAR1Q8TDU6 330 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 ESR2Q92731 530 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DPF2Q92785 391 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 BRF1Q92994 677 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DYNLL2Q96FJ2 89 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF274Q96GC6 653 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 INTS4Q96HW7 963 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZBED3Q96IU2 234 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 IDI2Q9BXS1 227 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 GBP3Q9H0R5 595 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 TDRD3Q9H7E2 651 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 SH2B1Q9NRF2 756 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DNAJB12Q9NXW2 375 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDX20Q9UHI6 824 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 DMTF1Q9Y222 760 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 POLR2AP24928 1970 aaKnown RBP5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 LAMB1P07942 1786 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 ROBO3Q96MS0 1386 aa5.92□□□□□ -1.46
HMGB1P4-201ENST00000455362 BAZ2BQ9UIF8 2168 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 TCRBV16S1A1N1A0A5B0 115 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC35F4A4IF30 521 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 CHURC1-FNTBB4DL54 471 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 F5H423 210 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SH2B2O14492 632 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 IFIT3O14879 490 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 RANBP6O60518 1105 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 PFKFB2O60825 505 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ENTPD3O75355 529 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LARGE1O95461 756 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 IL33O95760 270 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LTFP02788 710 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 FAM163BP0C2L3 166 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 HSPA6P17066 643 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LPOP22079 712 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 PDIA3P30101 505 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 POLR2BP30876 1174 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LIFRP42702 1097 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 NT5C2P49902 561 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 GMPSP49915 693 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms