RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FAM109BQ6ICB4 259 aaPredicted RBP31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.05■■■□□ 2.561e-9■■■■■ 60.2
SMARCC1-203ENST00000454240 RNF149Q8NC42 400 aa31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 LEO1Q8WVC0 666 aaPredicted RBP31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 SLC9A7Q96T83 725 aa31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 RUSC1Q9BVN2 902 aa31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 INO80BQ9C086 356 aaPredicted RBP31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 CIZ1Q9ULV3 898 aaPredicted RBP31.05■■■□□ 2.56
SMARCC1-203ENST00000454240 ENPP3O14638 875 aa31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 ATP2A2P16615 1042 aaKnown RBP31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 NCLP19338 710 aaKnown RBP31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 DEFB103AP81534 67 aa31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 SHC4Q6S5L8 630 aa31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 RTN4RL1Q86UN2 441 aaPredicted RBP31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 RAD54LQ92698 747 aa31.04■■■□□ 2.56
SMARCC1-203ENST00000454240 MYH11P35749 1972 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 SOX1O00570 391 aaPredicted RBP31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 CSDE1O75534 798 aaKnown RBP31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 ME1P48163 572 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 SMAD3P84022 425 aaKnown RBP31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 CAPSQ13938 189 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 TFDP1Q14186 410 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 SRGAP1Q7Z6B7 1085 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 LINC01599Q8WXQ3 324 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 SPATA32Q96LK8 384 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 KCND2Q9NZV8 630 aa31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 RBM19Q9Y4C8 960 aaKnown RBP31.03■■■□□ 2.56
SMARCC1-203ENST00000454240 TTC3P53804 2025 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 GRXCR1A8MXD5 290 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 SSBP05455 408 aaKnown RBP eCLIP31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 GUCY2CP25092 1073 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 PTENP60484 403 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 RRAGBQ5VZM2 374 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 IFNLR1Q8IU57 520 aaPredicted RBP31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 KIFAP3Q92845 792 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 NFKBIZQ9BYH8 718 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 SCAND2PQ9GZW5 306 aaPredicted RBP31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 TSHZ2Q9NRE2 1034 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 STK17AQ9UEE5 414 aa31.02■■■□□ 2.56
SMARCC1-203ENST00000454240 AMHP03971 560 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 FGFR4P22455 802 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 MCM6Q14566 821 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 NAALADL2Q58DX5 795 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 ARSHQ5FYA8 562 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 LARP4BQ92615 738 aaKnown RBP31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 TIPINQ9BVW5 301 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 TSPYL2Q9H2G4 693 aaPredicted RBP31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 MINDY3Q9H8M7 445 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 POLD4Q9HCU8 107 aa31.01■■■□□ 2.55
SMARCC1-203ENST00000454240 A0A087X0B3 334 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 MGEA5O60502 916 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 PHKA2P46019 1235 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 DSC3Q14574 896 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 CCDC73Q6ZRK6 1079 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 HERC6Q8IVU3 1022 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 DAW1Q8N136 415 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 BSNDQ8WZ55 320 aa31■■■□□ 2.55
SMARCC1-203ENST00000454240 HIP1RO75146 1068 aa30.99■■■□□ 2.55
SMARCC1-203ENST00000454240 SFPQP23246 707 aaKnown RBP eCLIP30.99■■■□□ 2.55
SMARCC1-203ENST00000454240 MAPK7Q13164 816 aa30.99■■■□□ 2.55
SMARCC1-203ENST00000454240 TOP1MTQ969P6 601 aa30.99■■■□□ 2.55
SMARCC1-203ENST00000454240 PANK2Q9BZ23 570 aa30.99■■■□□ 2.55
SMARCC1-203ENST00000454240 FXR1P51114 621 aaKnown RBP eCLIP30.98■■■□□ 2.559e-8■□□□□ 9.1
SMARCC1-203ENST00000454240 RESP18Q5W5W9 173 aa30.98■■■□□ 2.55
SMARCC1-203ENST00000454240 TMCO2Q7Z6W1 182 aaPredicted RBP30.98■■■□□ 2.55
SMARCC1-203ENST00000454240 MYOCDQ8IZQ8 938 aa30.98■■■□□ 2.55
SMARCC1-203ENST00000454240 DRC1Q96MC2 740 aa30.98■■■□□ 2.55
SMARCC1-203ENST00000454240 ADAM2Q99965 735 aa30.98■■■□□ 2.55
SMARCC1-203ENST00000454240 RGS18Q9NS28 235 aa30.98■■■□□ 2.55
SMARCC1-203ENST00000454240 NAMPTP43490 491 aa30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 DHX8Q14562 1220 aaKnown RBP30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 PPP2R5AQ15172 486 aa30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 ADALQ6DHV7 355 aa30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 GPBP1Q86WP2 473 aa30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 LRCH3Q96II8 777 aa30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 PBX4Q9BYU1 374 aa30.97■■■□□ 2.55
SMARCC1-203ENST00000454240 LRRIQ4A6NIV6 560 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 GJB5O95377 273 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 STAT6P42226 847 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 RABGGTBP53611 331 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 PCBP1Q15365 356 aaKnown RBP eCLIP30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 CDCA2Q69YH5 1023 aaPredicted RBP30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 CATSPER4Q7RTX7 472 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 CRIPAKQ8N1N5 446 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 PDILTQ8N807 584 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 IFT74Q96LB3 600 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 C17orf75Q9HAS0 396 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 CHST12Q9NRB3 414 aa30.96■■■□□ 2.55
SMARCC1-203ENST00000454240 NPHP3-ACAD11A0A0J9YXS1 232 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 DENND3A2RUS2 1198 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 PBX2P40425 430 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 MBTD1Q05BQ5 628 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 RAD51AP2Q09MP3 1159 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 E2F4Q16254 413 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 C1orf112Q9NSG2 853 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 CHMP5Q9NZZ3 219 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 PCDHA11Q9Y5I1 949 aa30.95■■■□□ 2.55
SMARCC1-203ENST00000454240 C9IYK1 514 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 INO80B-WBP1J3KQ70 363 aa30.94■■■□□ 2.54
SMARCC1-203ENST00000454240 ZSCAN20P17040 1043 aaPredicted RBP30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms