RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 MTMR9Q96QG7 549 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 TMEM117Q9H0C3 514 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 ALG13Q9NP73 1137 aaKnown RBP11.93□□□□□ -0.5
DDX39A-203ENST00000454233 CHST12Q9NRB3 414 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
DDX39A-203ENST00000454233 COL4A3BPQ9Y5P4 624 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 TTC28Q96AY4 2481 aa11.93□□□□□ -0.5
DDX39A-203ENST00000454233 A0A0U1RQF3 1178 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 WNT7AO00755 349 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 CSPG5O95196 566 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 LYPLA2O95372 231 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 EOMESO95936 686 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 ITGB1P05556 798 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 SKIP12755 728 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 LAG3P18627 525 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 KCNA5P22460 613 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
DDX39A-203ENST00000454233 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 KSR1Q8IVT5 923 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 THNSL1Q8IYQ7 743 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
DDX39A-203ENST00000454233 TMEM143Q96AN5 459 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 PABPC5Q96DU9 382 aaKnown RBP11.92□□□□□ -0.5
DDX39A-203ENST00000454233 MTRQ99707 1265 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 HSD17B14Q9BPX1 270 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-203ENST00000454233 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
DDX39A-203ENST00000454233 TYW1Q9NV66 732 aaKnown RBP11.92□□□□□ -0.5
DDX39A-203ENST00000454233 PIN4Q9Y237 131 aaKnown RBP11.92□□□□□ -0.5
DDX39A-203ENST00000454233 FNDC1Q4ZHG4 1894 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-203ENST00000454233 BRWD1Q9NSI6 2320 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 TCF20Q9UGU0 1960 aaKnown RBP11.91□□□□□ -0.5
DDX39A-203ENST00000454233 POTEMA6NI47 508 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 ZBTB39O15060 712 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 SRGAP2CP0DJJ0 459 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 UBE3AQ05086 875 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 LAMTOR4Q0VGL1 99 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 ZNF174Q15697 407 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 TTC38Q5R3I4 469 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 LRRC43Q8N309 656 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 COLGALT1Q8NBJ5 622 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 ERMNQ8TAM6 284 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 POF1BQ8WVV4 589 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 CLDND1Q9NY35 253 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 MYO7AQ13402 2215 aa11.91□□□□□ -0.5
DDX39A-203ENST00000454233 KIAA1671Q9BY89 1806 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 DGAT1O75907 488 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 TECP42680 631 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 PHKA2P46019 1235 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 MCM2P49736 904 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 RAB27AP51159 221 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 TFDP1Q14186 410 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 MXD4Q14582 209 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 PUS10Q3MIT2 529 aaKnown RBP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 FERMT3Q86UX7 667 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 RNF149Q8NC42 400 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 MICAL1Q8TDZ2 1067 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 RSPH1Q8WYR4 309 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 ZNF558Q96NG5 402 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 NECAB3Q96P71 396 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 MRPL9Q9BYD2 267 aaKnown RBP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 CWH43Q9H720 699 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 IFT122Q9HBG6 1241 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 TUFT1Q9NNX1 390 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 PUF60Q9UHX1 559 aaKnown RBP11.9□□□□□ -0.5
DDX39A-203ENST00000454233 FAM50BQ9Y247 325 aa11.9□□□□□ -0.5
DDX39A-203ENST00000454233 H3BQ06 376 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-203ENST00000454233 FGF18O76093 207 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 ERLIN2O94905 339 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 ATF7P17544 494 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-203ENST00000454233 DNAJB1P25685 340 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 PPM1AP35813 382 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 RARRES1P49788 294 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 NCBP1Q09161 790 aaKnown RBP11.89□□□□□ -0.51
DDX39A-203ENST00000454233 HYAL1Q12794 435 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 CAMK1Q14012 370 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-203ENST00000454233 KCNT2Q6UVM3 1135 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 PGBD4Q96DM1 585 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 IGFLR1Q9H665 355 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 XPNPEP1Q9NQW7 623 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 TLR9Q9NR96 1032 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 FAM105AQ9NUU6 356 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms