RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PDHA1P08559 390 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ARFIP2P53365 341 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 DPYDQ12882 1025 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ZNF211Q13398 564 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 TMED1Q13445 227 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 CCDC137Q6PK04 289 aaKnown RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 TRIM56Q9BRZ2 755 aaKnown RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 AMACRQ9UHK6 382 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ARL2BPQ9Y2Y0 163 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 HSPA8P11142 646 aaKnown RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 GRM4Q14833 912 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 FSCBQ5H9T9 825 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 AGBL2Q5U5Z8 902 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 SH2D3CQ8N5H7 860 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 DEPDC1BQ8WUY9 529 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 CFAP36Q96G28 342 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 BARHL2Q9NY43 387 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ZNF185O15231 689 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 CFLARO15519 480 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 CTTNQ14247 550 aaKnown RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 DRAP1Q14919 205 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 CCNYQ8ND76 341 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-207ENST00000453963 FAM20AQ96MK3 541 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 NUDCD1Q96RS6 583 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 GH2P01242 217 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 LSP1P33241 339 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 AP2B1P63010 937 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 C1orf146Q5VVC0 180 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 MIS18BP1Q6P0N0 1132 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 ERICH1Q86X53 443 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 E9PMD0 336 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 ZBTB22O15209 634 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 ELF1P32519 619 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 IREB2P48200 963 aaKnown RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 ARHGEF6Q15052 776 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 PDCD2Q16342 344 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 MMGT1Q8N4V1 131 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SNF8Q96H20 258 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 ALKQ9UM73 1620 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 CACNB3P54284 484 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 TFDP2Q14188 446 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 REXO1L1PQ8IX06 675 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 APOL6Q9BWW8 343 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 CLTCL1P53675 1640 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 ZBTB5O15062 677 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 STAT4Q14765 748 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SLFN12LQ6IEE8 588 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 BZW1Q7L1Q6 419 aaKnown RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 LRRC43Q8N309 656 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SH3RF3Q8TEJ3 882 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 STAMBPL1Q96FJ0 436 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 RNPC3Q96LT9 517 aaKnown RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 CRKP46108 304 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 SPOPLQ6IQ16 392 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-207ENST00000453963 AP5M1Q9H0R1 490 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 NDE1Q9NXR1 346 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 ORC6Q9Y5N6 252 aa12.85□□□□□ -0.35
SEC16A-207ENST00000453963 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 TYW5A2RUC4 315 aaKnown RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 PP2D1A8MPX8 630 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 FTLP02792 175 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-207ENST00000453963 LRRC14Q15048 493 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 MCUQ8NE86 351 aa12.84□□□□□ -0.35
SEC16A-207ENST00000453963 FAF2Q96CS3 445 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms