RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ZNF598Q86UK7 904 aaKnown RBP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 ECHDC2Q86YB7 292 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 PIGOQ8TEQ8 1089 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 TCP11Q8WWU5 503 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 P2RX5Q93086 422 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 NLRP4Q96MN2 994 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 MTRQ99707 1265 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 TRAIPQ9BWF2 469 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 PLVAPQ9BX97 442 aa16.25■□□□□ 0.19
HSPG2-207ENST00000453796 COL25A1Q9BXS0 654 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 INO80BQ9C086 356 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-207ENST00000453796 A0A087WWV3 80 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 ASAP2O43150 1006 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 DGAT1O75907 488 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 FGFR1P11362 822 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 IBSPP21815 317 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-207ENST00000453796 SFPQP23246 707 aaKnown RBP eCLIP16.24■□□□□ 0.19
HSPG2-207ENST00000453796 RPA1P27694 616 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 LAMTOR4Q0VGL1 99 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 PTGDRQ13258 359 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 C11orf84Q9BUA3 381 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-207ENST00000453796 MINDY3Q9H8M7 445 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 ATP6V0A4Q9HBG4 840 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
HSPG2-207ENST00000453796 CHST12Q9NRB3 414 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 SMC3Q9UQE7 1217 aa16.24■□□□□ 0.19
HSPG2-207ENST00000453796 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-207ENST00000453796 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
HSPG2-207ENST00000453796 TBKBP1A7MCY6 615 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 DLL1O00548 723 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 GRM6O15303 877 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 MUTP22033 750 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 NAALADL2Q58DX5 795 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 SRGAP1Q7Z6B7 1085 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 IFNLR1Q8IU57 520 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-207ENST00000453796 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 CASD1Q96PB1 797 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 CWH43Q9H720 699 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
HSPG2-207ENST00000453796 DBR1Q9UK59 544 aaKnown RBP16.23■□□□□ 0.19
HSPG2-207ENST00000453796 LAD1O00515 517 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 EOMESO95936 686 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 ITGB1P05556 798 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 SRGAP2CP0DJJ0 459 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 ARL2P36404 184 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 PRPHP41219 470 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 POU5F1BQ06416 359 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 CAMK1Q14012 370 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 PDIA5Q14554 519 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 MXD4Q14582 209 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-207ENST00000453796 ECM1Q16610 540 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 PTPROQ16827 1216 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 TJAP1Q5JTD0 557 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 CLLU1OSQ5K130 101 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 MCTP1Q6DN14 999 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 POTEGQ6S5H5 508 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 CATSPER4Q7RTX7 472 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 RNF149Q8NC42 400 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 ASAP3Q8TDY4 903 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 ASB2Q96Q27 587 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 TMEM117Q9H0C3 514 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 LMAN2LQ9H0V9 348 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 COG5Q9UP83 839 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 PLAGL2Q9UPG8 496 aa16.22■□□□□ 0.19
HSPG2-207ENST00000453796 HOXA2O43364 376 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 PHKA2P46019 1235 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 PTENP60484 403 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 MRPS5P82675 430 aaKnown RBP16.21■□□□□ 0.19
HSPG2-207ENST00000453796 TFF2Q03403 129 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 CAPSQ13938 189 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 SKIV2LQ15477 1246 aaKnown RBP16.21■□□□□ 0.19
HSPG2-207ENST00000453796 IL17AQ16552 155 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 TIGD5Q53EQ6 642 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 RILPL1Q5EBL4 403 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 LRRC55Q6ZSA7 311 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 KLHL23Q8NBE8 558 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 ERMNQ8TAM6 284 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 SPPL3Q8TCT6 385 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 NACC1Q96RE7 527 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
HSPG2-207ENST00000453796 PIN4Q9Y237 131 aaKnown RBP16.21■□□□□ 0.19
HSPG2-207ENST00000453796 MUC3AQ02505 3323 aa16.21■□□□□ 0.19
HSPG2-207ENST00000453796 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 H3BQV1 296 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 USO1O60763 962 aaKnown RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 ZNF623O75123 536 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 GLRA2P23416 452 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 DNAJB1P25685 340 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 HOXA11P31270 313 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 COL19A1Q14993 1142 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
HSPG2-207ENST00000453796 HAUS3Q68CZ6 603 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 COLGALT1Q8NBJ5 622 aa16.2■□□□□ 0.18
HSPG2-207ENST00000453796 HLA-CQ95604 372 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms