RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DOCK1Q14185 1865 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 PCNTO95613 3336 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
VTA1-203ENST00000452973 VSNL1P62760 191 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 CYFIP1Q7L576 1253 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 GOLGA5Q8TBA6 731 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 CCDC127Q96BQ5 260 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 TMEM206Q9H813 350 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 DMAC2Q9NW81 257 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 USP20Q9Y2K6 914 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 SSC5DA1L4H1 1573 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 EMSYQ7Z589 1322 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 ANO9A1A5B4 782 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 SASH3O75995 380 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 KCNA2P16389 499 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 DRAP1Q14919 205 aaPredicted RBP12.83□□□□□ -0.35
VTA1-203ENST00000452973 CCDC60Q8IWA6 550 aaPredicted RBP12.83□□□□□ -0.35
VTA1-203ENST00000452973 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 GPRASP2Q96D09 838 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 SLC9A2Q9UBY0 812 aa12.83□□□□□ -0.35
VTA1-203ENST00000452973 ZRANB2O95218 330 aaKnown RBP eCLIP12.83□□□□□ -0.36
VTA1-203ENST00000452973 USP8P40818 1118 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ACTR2P61160 394 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 SP2Q02086 613 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 DMP1Q13316 513 aaPredicted RBP12.83□□□□□ -0.36
VTA1-203ENST00000452973 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 MTERF2Q49AM1 385 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
VTA1-203ENST00000452973 OSBPL9Q96SU4 736 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ADAMTS5Q9UNA0 930 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 UBE4BO95155 1302 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 DENND3A2RUS2 1198 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 IRF6O14896 467 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 EVI5O60447 810 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 STAT1P42224 750 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 NPTX2P47972 431 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 SMTNP53814 917 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 OAZ1P54368 228 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ZNF746Q6NUN9 644 aaPredicted RBP12.83□□□□□ -0.36
VTA1-203ENST00000452973 OTUD6AQ7L8S5 288 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 SAMD3Q8N6K7 520 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 U2AF1L4Q8WU68 220 aaKnown RBP12.83□□□□□ -0.36
VTA1-203ENST00000452973 MS4A14Q96JA4 679 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 GDAP1L1Q96MZ0 367 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.36
VTA1-203ENST00000452973 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
VTA1-203ENST00000452973 ANKRD63C9JTQ0 380 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 RBAK-RBAKDNI3L0D1 243 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 PJA2O43164 708 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 LYPLA2O95372 231 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 PSAPP07602 524 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 VAMP7P51809 220 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 CKAP4Q07065 602 aaKnown RBP12.82□□□□□ -0.36
VTA1-203ENST00000452973 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 WDR78Q5VTH9 848 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 TXLNBQ8N3L3 684 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 ATP6V0A1Q93050 837 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 CCDC151A5D8V7 595 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 PRKCEQ02156 737 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 CBWD2Q8IUF1 395 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 GLYCTKQ8IVS8 523 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
VTA1-203ENST00000452973 POP1Q99575 1024 aaKnown RBP12.82□□□□□ -0.36
VTA1-203ENST00000452973 TLR10Q9BXR5 811 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 R3HDMLQ9H3Y0 253 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 PHIPQ8WWQ0 1821 aa12.82□□□□□ -0.36
VTA1-203ENST00000452973 NAB2Q15742 525 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 STXBP2Q15833 593 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 VPS36Q86VN1 386 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 CREG2Q8IUH2 290 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 BICD1Q96G01 975 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 FAM84AQ96KN4 292 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 UBE2TQ9NPD8 197 aaPredicted RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 GTPBP10A4D1E9 387 aaKnown RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 F8VZ95 297 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 ABCB4P21439 1286 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 IRX3P78415 501 aaPredicted RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 GTF2BQ00403 316 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 MSANTD4Q8NCY6 345 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms