RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FOXD4L4Q8WXT5 416 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 ZNF668Q96K58 619 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 ZNF396Q96N95 335 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 FTHL17Q9BXU8 183 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 ATP6V0A4Q9HBG4 840 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 ERVK-5Q9HDB9 667 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 BMP2KQ9NSY1 1161 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 ST3GAL5Q9UNP4 418 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 MORC2Q9Y6X9 1032 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 MYH15Q9Y2K3 1946 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 TNFRSF10AO00220 468 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 ENPP3O14638 875 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 ASAP2O43150 1006 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 AMHP03971 560 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 DARSP14868 501 aaKnown RBP22.18■■□□□ 1.14
COL9A3-202ENST00000452372 NASPP49321 788 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-202ENST00000452372 NFX1Q12986 1120 aaKnown RBP22.18■■□□□ 1.14
COL9A3-202ENST00000452372 SLC39A14Q15043 492 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 HYIQ5T013 277 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 FAM228AQ86W67 206 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 KSR1Q8IVT5 923 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 ADAMTS19Q8TE59 1207 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 SCLT1Q96NL6 688 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 DNM3Q9UQ16 869 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 SRPRBQ9Y5M8 271 aaKnown RBP22.18■■□□□ 1.14
COL9A3-202ENST00000452372 COL4A3BPQ9Y5P4 624 aa22.18■■□□□ 1.14
COL9A3-202ENST00000452372 COL4A4P53420 1690 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 MYO7AQ13402 2215 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 A0A087WZ62 844 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 SLC26A4O43511 780 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 MARCKSP29966 332 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 GRIN1Q05586 938 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 PADI6Q6TGC4 694 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 SP7Q8TDD2 431 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 GDPD5Q8WTR4 605 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 TOP1MTQ969P6 601 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 TGS1Q96RS0 853 aaKnown RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 FDXACB1Q9BRP7 624 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 GCOM2Q9BZD3 368 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 NT5C3AQ9H0P0 336 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 TSPYL2Q9H2G4 693 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 BHMT2Q9H2M3 363 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 FBXO2Q9UK22 296 aaPredicted RBP22.17■■□□□ 1.14
COL9A3-202ENST00000452372 INSL6Q9Y581 213 aa22.17■■□□□ 1.14
COL9A3-202ENST00000452372 ARHGEF35A5YM69 484 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 USO1O60763 962 aaKnown RBP22.16■■□□□ 1.14
COL9A3-202ENST00000452372 EYA4O95677 639 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 ARL2P36404 184 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 UBA7P41226 1012 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 LAMTOR4Q0VGL1 99 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 MXD4Q14582 209 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-202ENST00000452372 RTN4RL1Q86UN2 441 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-202ENST00000452372 CABP7Q86V35 215 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 MYOCDQ8IZQ8 938 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 MCPH1Q8NEM0 835 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 NLRP4Q96MN2 994 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 PNMA5Q96PV4 448 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 TMX1Q9H3N1 280 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 LMCD1Q9NZU5 365 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 TFIP11Q9UBB9 837 aaKnown RBP22.16■■□□□ 1.14
COL9A3-202ENST00000452372 MTUS1Q9ULD2 1270 aa22.16■■□□□ 1.14
COL9A3-202ENST00000452372 TTC3P53804 2025 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 E9PMD0 336 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 BRD1O95696 1058 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 SRGAP2CP0DJJ0 459 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 CYP11B2P19099 503 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 KCNQ1P51787 676 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 ZRSR1Q15695 479 aaKnown RBP22.15■■□□□ 1.14
COL9A3-202ENST00000452372 LINC00301Q8NCQ3 95 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 C17orf80Q9BSJ5 609 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 INO80BQ9C086 356 aaPredicted RBP22.15■■□□□ 1.14
COL9A3-202ENST00000452372 IFT122Q9HBG6 1241 aa22.15■■□□□ 1.14
COL9A3-202ENST00000452372 POU5F1BQ06416 359 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 STK38Q15208 465 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 SKIV2LQ15477 1246 aaKnown RBP22.14■■□□□ 1.13
COL9A3-202ENST00000452372 ATL3Q6DD88 541 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 KCNK18Q7Z418 384 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 LINC01599Q8WXQ3 324 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 CALML4Q96GE6 196 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 CDK5RAP3Q96JB5 506 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 NECAB3Q96P71 396 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-202ENST00000452372 UHRF1Q96T88 793 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-202ENST00000452372 CSRNP2Q9H175 543 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 ZDHHC9Q9Y397 364 aa22.14■■□□□ 1.13
COL9A3-202ENST00000452372 TMEM119Q4V9L6 283 aa22.13■■□□□ 1.13
COL9A3-202ENST00000452372 SRGAP1Q7Z6B7 1085 aa22.13■■□□□ 1.13
COL9A3-202ENST00000452372 CLIC6Q96NY7 704 aa22.13■■□□□ 1.13
COL9A3-202ENST00000452372 PLIN2Q99541 437 aa22.13■■□□□ 1.13
COL9A3-202ENST00000452372 CCSER1Q9C0I3 900 aa22.13■■□□□ 1.13
COL9A3-202ENST00000452372 POLR3FQ9H1D9 316 aaPredicted RBP22.13■■□□□ 1.13
COL9A3-202ENST00000452372 SPTLC2O15270 562 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 MGEA5O60502 916 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 CSDE1O75534 798 aaKnown RBP22.12■■□□□ 1.13
COL9A3-202ENST00000452372 YEATS4O95619 227 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 GLRA2P23416 452 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 TFDP1Q14186 410 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 DSC3Q14574 896 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-202ENST00000452372 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-202ENST00000452372 MAEAQ7L5Y9 396 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms