RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 UNC13DQ70J99 1090 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 MAEAQ7L5Y9 396 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 DYMQ7RTS9 669 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 ZNF410Q86VK4 478 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 GRAMD1CQ8IYS0 662 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 KCNN1Q92952 543 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 NOC4LQ9BVI4 516 aaKnown RBP12.81□□□□□ -0.36
SCN9A-204ENST00000452182 NFKBIZQ9BYH8 718 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 SEL1LQ9UBV2 794 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 AKT3Q9Y243 479 aa12.81□□□□□ -0.36
SCN9A-204ENST00000452182 RSPH10B2B2RC85 870 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 KIAA0355O15063 1070 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 GPR32O75388 356 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 FAM13AO94988 1023 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 VTNP04004 478 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 RSPH10BP0C881 870 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 CKBP12277 381 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SIP14410 1827 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SCP2P22307 547 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 THPOP40225 353 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 NAMPTP43490 491 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 GPC3P51654 580 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 ASIC1P78348 528 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 EHHADHQ08426 723 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 MGAT3Q09327 533 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 TFDP1Q14186 410 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 RHPN2Q8IUC4 686 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 CCDC65Q8IXS2 484 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 ASAP3Q8TDY4 903 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SPIRE2Q8WWL2 714 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 IFT74Q96LB3 600 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 TANC1Q9C0D5 1861 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 ADAMTS10Q9H324 1103 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 CLSTN2Q9H4D0 955 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 OLFML3Q9NRN5 406 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 TMEM39AQ9NV64 488 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 M0QZ92 97 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 KLRC4O43908 158 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 PARNO95453 639 aaKnown RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 MAPTP10636 758 aaKnown RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SELPP16109 830 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 CRYBB1P53674 252 aaPredicted RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 CAPSQ13938 189 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 ZNF618Q5T7W0 954 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 TRAF7Q6Q0C0 670 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 GSDMAQ96QA5 445 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
SCN9A-204ENST00000452182 NUP62CLQ9H1M0 184 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 HIPK3Q9H422 1215 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 PANK4Q9NVE7 773 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SQORQ9Y6N5 450 aa12.8□□□□□ -0.36
SCN9A-204ENST00000452182 SFI1A8K8P3 1242 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 TRAK2O60296 914 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 SMC2O95347 1197 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 CHRNA1P02708 482 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 RPN1P04843 607 aaKnown RBP12.79□□□□□ -0.36
SCN9A-204ENST00000452182 IDEP14735 1019 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 CASP1P29466 404 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 NPTX2P47972 431 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
SCN9A-204ENST00000452182 SMTNP53814 917 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 PEX3P56589 373 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 PTENP60484 403 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 COASYQ13057 564 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 PNOCQ13519 176 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 KCNB1Q14721 858 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 PCBP1Q15365 356 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCN9A-204ENST00000452182 ODR4Q5SWX8 454 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 NT5DC1Q5TFE4 455 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
SCN9A-204ENST00000452182 KSR1Q8IVT5 923 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 MYCT1Q8N699 235 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 FIZ1Q96SL8 496 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 ST6GALNAC4Q9H4F1 302 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 IFT122Q9HBG6 1241 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 POLD4Q9HCU8 107 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 TRPV2Q9Y5S1 764 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 CDY2AQ9Y6F7 541 aa12.79□□□□□ -0.36
SCN9A-204ENST00000452182 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 H0YCG3 227 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 SRGAP2CP0DJJ0 459 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 ABCD1P33897 745 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 RGS19P49795 217 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 TMEM62Q0P6H9 643 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 PSMD2Q13200 908 aa12.78□□□□□ -0.36
SCN9A-204ENST00000452182 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms