RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 POLR3FQ9H1D9 316 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-212ENST00000451542 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 RWDD3Q9Y3V2 267 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-212ENST00000451542 A0A087WWV3 80 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 INO80B-WBP1J3KQ70 363 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 F13A1P00488 732 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 MYOGP15173 224 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 CDC25AP30304 524 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 ARL2P36404 184 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 RAB27AP51159 221 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 BTG3Q14201 252 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 HYIQ5T013 277 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 TWF2Q6IBS0 349 aaKnown RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 TMCO2Q7Z6W1 182 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 TGS1Q96RS0 853 aaKnown RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 ELAC1Q9H777 363 aaKnown RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 TMEM161AQ9NX61 479 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 PIN4Q9Y237 131 aaKnown RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
SMPD4-212ENST00000451542 CLIC4Q9Y696 253 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 PHLPP2Q6ZVD8 1323 aa13.35□□□□□ -0.27
SMPD4-212ENST00000451542 LRRIQ4A6NIV6 560 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 C9IYK1 514 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 E9PMD0 336 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 DGKIO75912 1065 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 EOMESO95936 686 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 MARCKSP29966 332 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 AXLP30530 894 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 PTENP60484 403 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 TAP1Q03518 808 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 PTPAQ15257 358 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 RTN4RL1Q86UN2 441 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 DEPTORQ8TB45 409 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 DRC1Q96MC2 740 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 USP28Q96RU2 1077 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 CDX2Q99626 313 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-212ENST00000451542 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 C17orf75Q9HAS0 396 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
SMPD4-212ENST00000451542 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 RANBP2P49792 3224 aaKnown RBP13.33□□□□□ -0.28
SMPD4-212ENST00000451542 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 SPTLC2O15270 562 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 PPP6R2O75170 966 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 SLC34A2O95436 690 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 YEATS4O95619 227 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 FOSL2P15408 326 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 GLRA2P23416 452 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 NAMPTP43490 491 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 NASPP49321 788 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-212ENST00000451542 CAPSQ13938 189 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 DSC3Q14574 896 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 GRIN2CQ14957 1233 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 ECM1Q16610 540 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-212ENST00000451542 CMTR2Q8IYT2 770 aaKnown RBP13.33□□□□□ -0.28
SMPD4-212ENST00000451542 HACE1Q8IYU2 909 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-212ENST00000451542 ARNTL2Q8WYA1 636 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 PGBD4Q96DM1 585 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 PRIMPOLQ96LW4 560 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 MMTAG2Q9BU76 263 aaKnown RBP13.33□□□□□ -0.28
SMPD4-212ENST00000451542 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 AGPAT5Q9NUQ2 364 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
SMPD4-212ENST00000451542 LINC01553A4QN01 128 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 CARNS1A5YM72 827 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 KRT18P05783 430 aaKnown RBP13.32□□□□□ -0.28
SMPD4-212ENST00000451542 PLA2G4BP0C869 781 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 FGFR4P22455 802 aa13.32□□□□□ -0.28
SMPD4-212ENST00000451542 EFNA5P52803 228 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms