RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 VAV3Q9UKW4 847 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 LZTS1Q9Y250 596 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 MAFO75444 373 aaPredicted RBP30.44■■■□□ 2.46
USP42-204ENST00000451154 EOMESO95936 686 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 DUSP6Q16828 381 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 PDE12Q6L8Q7 609 aaKnown RBP30.44■■■□□ 2.46
USP42-204ENST00000451154 PIK3AP1Q6ZUJ8 805 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 RHPN2Q8IUC4 686 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 KSR1Q8IVT5 923 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 LRRC43Q8N309 656 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 VN1R2Q8NFZ6 395 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 FAM20AQ96MK3 541 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 ZNF558Q96NG5 402 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 KCNMB3Q9NPA1 279 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 DACT1Q9NYF0 836 aa30.44■■■□□ 2.46
USP42-204ENST00000451154 CCNT1O60563 726 aaKnown RBP30.43■■■□□ 2.46
USP42-204ENST00000451154 CTDNEP1O95476 244 aa30.43■■■□□ 2.46
USP42-204ENST00000451154 ATF7P17544 494 aaPredicted RBP30.43■■■□□ 2.46
USP42-204ENST00000451154 XBP1P17861 261 aa30.43■■■□□ 2.46
USP42-204ENST00000451154 PPP2R5CQ13362 524 aa30.43■■■□□ 2.46
USP42-204ENST00000451154 PPP4R3AQ6IN85 833 aa30.43■■■□□ 2.46
USP42-204ENST00000451154 RNF135Q8IUD6 432 aa30.43■■■□□ 2.46
USP42-204ENST00000451154 STK36Q9NRP7 1315 aa30.43■■■□□ 2.46
USP42-204ENST00000451154 QARSP47897 775 aaKnown RBP30.42■■■□□ 2.46
USP42-204ENST00000451154 NPEPPSP55786 919 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 ZNF579Q8NAF0 562 aaKnown RBP30.42■■■□□ 2.46
USP42-204ENST00000451154 HAS1Q92839 578 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 CDCA3Q99618 268 aaPredicted RBP30.42■■■□□ 2.46
USP42-204ENST00000451154 TCF25Q9BQ70 676 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 ENTPD7Q9NQZ7 604 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 CHST12Q9NRB3 414 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 SPG21Q9NZD8 308 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 ORC3Q9UBD5 711 aaPredicted RBP30.42■■■□□ 2.46
USP42-204ENST00000451154 MUTYHQ9UIF7 546 aa30.42■■■□□ 2.46
USP42-204ENST00000451154 USP15Q9Y4E8 981 aaPredicted RBP30.42■■■□□ 2.46
USP42-204ENST00000451154 ARIH1Q9Y4X5 557 aaPredicted RBP30.42■■■□□ 2.46
USP42-204ENST00000451154 KRT17Q04695 432 aa30.41■■■□□ 2.46
USP42-204ENST00000451154 LONRF3Q496Y0 759 aa30.41■■■□□ 2.46
USP42-204ENST00000451154 EARS2Q5JPH6 523 aaKnown RBP30.41■■■□□ 2.46
USP42-204ENST00000451154 CYP26B1Q9NR63 512 aa30.41■■■□□ 2.46
USP42-204ENST00000451154 WRAP73Q9P2S5 460 aaPredicted RBP30.41■■■□□ 2.46
USP42-204ENST00000451154 HIDE1A8MVS5 230 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 MARCH6O60337 910 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 GCFC2P16383 781 aaKnown RBP30.4■■■□□ 2.46
USP42-204ENST00000451154 SFPQP23246 707 aaKnown RBP eCLIP30.4■■■□□ 2.46
USP42-204ENST00000451154 PHKA2P46019 1235 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 AK2P54819 239 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 ZNF410Q86VK4 478 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 NECAB1Q8N987 351 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 NLRP4Q96MN2 994 aa30.4■■■□□ 2.46
USP42-204ENST00000451154 INO80BQ9C086 356 aaPredicted RBP30.4■■■□□ 2.46
USP42-204ENST00000451154 P4HBP07237 508 aaKnown RBP30.39■■■□□ 2.46
USP42-204ENST00000451154 PPM1AP35813 382 aa30.39■■■□□ 2.46
USP42-204ENST00000451154 TWF2Q6IBS0 349 aaKnown RBP30.39■■■□□ 2.46
USP42-204ENST00000451154 TMC7Q7Z402 723 aa30.39■■■□□ 2.46
USP42-204ENST00000451154 LPPQ93052 612 aa30.39■■■□□ 2.46
USP42-204ENST00000451154 CEP170P1Q96L14 293 aa30.39■■■□□ 2.46
USP42-204ENST00000451154 JPH2Q9BR39 696 aaPredicted RBP30.39■■■□□ 2.46
USP42-204ENST00000451154 NGRNQ9NPE2 291 aaKnown RBP30.39■■■□□ 2.46
USP42-204ENST00000451154 PIN4Q9Y237 131 aaKnown RBP30.39■■■□□ 2.46
USP42-204ENST00000451154 MUC6Q6W4X9 2439 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 FAM205CA6NFA0 338 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 NT5C1B-RDH14C9J2C7 533 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 ANAPC15P60006 121 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 ANKRD1Q15327 319 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 LLGL2Q6P1M3 1020 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 CATSPER4Q7RTX7 472 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 SLC39A11Q8N1S5 342 aa30.38■■■□□ 2.45
USP42-204ENST00000451154 TBX3O15119 743 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 DKC1O60832 514 aaKnown RBP eCLIP30.37■■■□□ 2.45
USP42-204ENST00000451154 FDPSP14324 419 aaKnown RBP30.37■■■□□ 2.45
USP42-204ENST00000451154 BCAR1P56945 870 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 KCNC3Q14003 757 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 EPHA7Q15375 998 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 HERC4Q5GLZ8 1057 aaPredicted RBP30.37■■■□□ 2.45
USP42-204ENST00000451154 POTEDQ86YR6 584 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 TMEM143Q96AN5 459 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 TRAIPQ9BWF2 469 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 RGL1Q9NZL6 768 aa30.37■■■□□ 2.45
USP42-204ENST00000451154 LOC730098B7Z3J9 87 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 TECP42680 631 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 ALDH7A1P49419 539 aaKnown RBP30.36■■■□□ 2.45
USP42-204ENST00000451154 NR5A1Q13285 461 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 NCAPH2Q6IBW4 605 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 TMEM184AQ6ZMB5 413 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 SLC7A3Q8WY07 619 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 WASF1Q92558 559 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 NAP1L4Q99733 375 aaKnown RBP30.36■■■□□ 2.45
USP42-204ENST00000451154 APOL5Q9BWW9 433 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 MRPL9Q9BYD2 267 aaKnown RBP30.36■■■□□ 2.45
USP42-204ENST00000451154 IFT122Q9HBG6 1241 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 PPP4R2Q9NY27 417 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 COL4A3BPQ9Y5P4 624 aa30.36■■■□□ 2.45
USP42-204ENST00000451154 FSD2A1L4K1 749 aa30.35■■■□□ 2.45
USP42-204ENST00000451154 SRGAP2CP0DJJ0 459 aa30.35■■■□□ 2.45
USP42-204ENST00000451154 POLGP54098 1239 aaPredicted RBP30.35■■■□□ 2.45
USP42-204ENST00000451154 ME3Q16798 604 aa30.35■■■□□ 2.45
USP42-204ENST00000451154 PRPF31Q8WWY3 499 aaKnown RBP30.35■■■□□ 2.45
USP42-204ENST00000451154 DYDC2Q96IM9 177 aa30.35■■■□□ 2.45
USP42-204ENST00000451154 LXNQ9BS40 222 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms