RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 TMEM260Q9NX78 707 aa6.15□□□□□ -1.42
GTF3C3-207ENST00000451088 TSC22D4Q9Y3Q8 395 aa6.15□□□□□ -1.42
GTF3C3-207ENST00000451088 RTEL1-TNFRSF6BF6WH68 1400 aa6.15□□□□□ -1.43
GTF3C3-207ENST00000451088 CEP162Q5TB80 1403 aa6.15□□□□□ -1.43
GTF3C3-207ENST00000451088 ABCC3O15438 1527 aa6.15□□□□□ -1.43
GTF3C3-207ENST00000451088 EHBP1L1Q8N3D4 1523 aa6.15□□□□□ -1.43
GTF3C3-207ENST00000451088 AHDC1Q5TGY3 1603 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 B4E1Z4 1266 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 GOLGA6L22H0YM25 854 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 MAFO75444 373 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 ASLP04424 464 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 IGFALSP35858 605 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 IRF9Q00978 393 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 NFYCQ13952 458 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 PUM1Q14671 1186 aaKnown RBP eCLIP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 ARHGAP44Q17R89 818 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 TRIM68Q6AZZ1 485 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 CC2D1AQ6P1N0 951 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 LRSAM1Q6UWE0 723 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 DDX53Q86TM3 631 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 Q8TCH9 128 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 NEIL1Q96FI4 390 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 BOCQ9BWV1 1114 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 KLC2Q9H0B6 622 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 ZSWIM4Q9H7M6 989 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 TMEM2Q9UHN6 1383 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 BLMP54132 1417 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 TIAM1Q13009 1591 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 DIP2AQ14689 1571 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 TET3O43151 1660 aa6.14□□□□□ -1.43
GTF3C3-207ENST00000451088 CHD2O14647 1828 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 EP400Q96L91 3159 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 M0R2C6 588 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 HIP1RO75146 1068 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 DNAJC8O75937 253 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 GLRX3O76003 335 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 HMGCRP04035 888 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 TNFRSF1AP19438 455 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 ADCY8P40145 1251 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 C1QTNF8P60827 252 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 CD83Q01151 205 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 R3HDM1Q15032 1099 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 ZNF568Q3ZCX4 644 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 TCTN3Q6NUS6 607 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 LARP4Q71RC2 724 aaKnown RBP eCLIP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 HIPK4Q8NE63 616 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 FOXRED1Q96CU9 486 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 GNRHR2Q96P88 292 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 SAMD15Q9P1V8 674 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 SETD5Q9C0A6 1442 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 NWD1Q149M9 1564 aa6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 KDM5AP29375 1690 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-207ENST00000451088 A0A0G2JNJ9 132 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 PRAMEF22A3QJZ6 481 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 MATN3O15232 486 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 FOXS1O43638 330 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 ZNF623O75123 536 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 RFPL3O75679 317 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 TSPY4P0CV99 314 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 TSPY10P0CW01 314 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 NKTRP30414 1462 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 KCNQ1P51787 676 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 RAC3P60763 192 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 ERVK-7P63135 1459 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 IDI1Q13907 227 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 TMEM132BQ14DG7 1078 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 RTN4RL1Q86UN2 441 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 CHST14Q8NCH0 376 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 DDX17Q92841 729 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 LRRC37BQ96QE4 947 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 CDK5RAP1Q96SZ6 601 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 SEMA4AQ9H3S1 761 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 Q9UFV3 132 aa6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 TNPO3Q9Y5L0 923 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-207ENST00000451088 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 NCOA3Q9Y6Q9 1424 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 MATN2O00339 956 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 TRAF5O00463 557 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 DVL2O14641 736 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 PPP1R12AO14974 1030 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 FNTBP49356 437 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 SELENOPP49908 381 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 RRADP55042 308 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 ALDH6A1Q02252 535 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 DUSP8Q13202 625 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 MOGSQ13724 837 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 ZNF460Q14592 562 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 TBR1Q16650 682 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 GRAMD4Q6IC98 578 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 ZNF585AQ6P3V2 769 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 OTOP2Q7RTS6 562 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 TAX1BP1Q86VP1 789 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 WDR48Q8TAF3 677 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 DEF6Q9H4E7 631 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 PIF1Q9H611 641 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 MSL2Q9HCI7 577 aa6.11□□□□□ -1.43
GTF3C3-207ENST00000451088 CDC42EP3Q9UKI2 254 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms