RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TTI2Q6NXR4 508 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZNF713Q8N859 430 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 FBF1Q8TES7 1133 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 PHACTR1Q9C0D0 580 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 DNAJC18Q9H819 358 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 CNOT10Q9H9A5 744 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 KBTBD4Q9NVX7 518 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 RBM47A0AV96 593 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 ATP6V1C1P21283 382 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 KIAA0753Q2KHM9 967 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 KRT26Q7Z3Y9 468 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 RASGRP4Q8TDF6 673 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 UBLCP1Q8WVY7 318 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZNF317Q96PQ6 595 aaPredicted RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 NDNQ99608 321 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 AGPAT5Q9NUQ2 364 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 HNRNPH3P31942 346 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 GBP1P32455 592 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 TMEM62Q0P6H9 643 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 CLUL1Q15846 466 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 CC2D2BQ6DHV5 1058 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 FOXR2Q6PJQ5 311 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 CROCCP2Q86T23 111 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 EIF1ADQ8N9N8 165 aaKnown RBP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 USP40Q9NVE5 1235 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 PCDHAC2Q9Y5I4 1007 aa14.55□□□□□ -0.08
SYNGAP1-204ENST00000449372 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 EDIL3O43854 480 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 FLOT1O75955 427 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 SCNN1DP51172 638 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 NFIAQ12857 509 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 STRIP1Q5VSL9 837 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 HEATR3Q7Z4Q2 680 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZFPM1Q8IX07 1006 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 IFT74Q96LB3 600 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 IQCGQ9H095 443 aaKnown RBP14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 UAP1Q16222 522 aaPredicted RBP14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 ATXN10Q9UBB4 475 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 CRKP46108 304 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZNF131P52739 623 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 NAPAP54920 295 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 SETDB1Q15047 1291 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 PPP2R5EQ16537 467 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 KRT71Q3SY84 523 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 SYN2Q92777 582 aaPredicted RBP14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 SERPINB13Q9UIV8 391 aa14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZMYND8Q9ULU4 1186 aaPredicted RBP14.54□□□□□ -0.08
SYNGAP1-204ENST00000449372 PICALMQ13492 652 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 SLC15A2Q16348 729 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 PABPC1LQ4VXU2 614 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 SFMBT2Q5VUG0 894 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 KRT79Q5XKE5 535 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 LRRC34Q8IZ02 419 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 TEKT1Q969V4 418 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 TRAPPC9Q96Q05 1148 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 DBNDD1Q9H9R9 158 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 DMAP1Q9NPF5 467 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 ESYT2A0FGR8 921 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 MMEP08473 750 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 CENPTQ96BT3 561 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 IDI2Q9BXS1 227 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 RAB17Q9H0T7 212 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 TMEM60Q9H2L4 133 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZNF263O14978 683 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 RAD23BP54727 409 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 COPS2P61201 443 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 RRAGAQ7L523 313 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 SH3BP5LQ7L8J4 393 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 LCA5Q86VQ0 697 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 GUF1Q8N442 669 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 ARHGEF3Q9NR81 526 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 MYH10P35580 1976 aa14.53□□□□□ -0.08
SYNGAP1-204ENST00000449372 COL4A5P29400 1685 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 TRIM49BA6NDI0 452 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 DESP17661 470 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 PSMC4P43686 418 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 DNA2P51530 1060 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 CUL1Q13616 776 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 NEK8Q86SG6 692 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 TLR10Q9BXR5 811 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.52□□□□□ -0.083e-27■■■■■ 503.1
SYNGAP1-204ENST00000449372 NKX1-2Q9UD57 310 aaPredicted RBP14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 FAM198AQ9UFP1 575 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 BZW2Q9Y6E2 419 aaKnown RBP14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 GNAZP19086 355 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 EIF4A3P38919 411 aaKnown RBP14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 UNC13DQ70J99 1090 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 MTMR8Q96EF0 704 aa14.52□□□□□ -0.08
SYNGAP1-204ENST00000449372 PJA2O43164 708 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 SERPING1P05155 500 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 SLURP2P0DP57 97 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 CHRNA5P30532 468 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 NAALADL2Q58DX5 795 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 OR52E8Q6IFG1 317 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms