RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 ZNF408Q9H9D4 720 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 DCP1AQ9NPI6 582 aaPredicted RBP8.32□□□□□ -1.08
LINC00349-201ENST00000448748 ERVK13-1Q9NX77 482 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 STRIP2Q9ULQ0 834 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 FHOD1Q9Y613 1164 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 FADS2P1A8MWK0 482 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 NRDCO43847 1150 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 WDHD1O75717 1129 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 MAP4K4O95819 1239 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 HSPA1AP0DMV8 641 aaKnown RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 HSPA1BP0DMV9 641 aaKnown RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 ITGA4P13612 1032 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 OS9Q13438 667 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 SLC14A2Q15849 920 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 SPTY2D1Q68D10 685 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 MOB2Q70IA6 237 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 NLRX1Q86UT6 975 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 FBXO15Q8NCQ5 510 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 KLHL6Q8WZ60 621 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 INTS4Q96HW7 963 aaKnown RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 SLC12A9Q9BXP2 914 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 TMEM39BQ9GZU3 492 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 SLC6A17Q9H1V8 727 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 EPB41L4BQ9H329 900 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 NOL6Q9H6R4 1146 aaKnown RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 VEZTQ9HBM0 779 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 CAPN10Q9HC96 672 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 GPR55Q9Y2T6 319 aaPredicted RBP8.31□□□□□ -1.08
LINC00349-201ENST00000448748 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 MYH1P12882 1939 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 AK9Q5TCS8 1911 aa8.31□□□□□ -1.08
LINC00349-201ENST00000448748 ENDOUP21128 410 aaKnown RBP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 NF2P35240 595 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 CACNB3P54284 484 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 RTP1P59025 263 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 MAP2K1Q02750 393 aaPredicted RBP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 TCEAL1Q15170 157 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 SUPT20HL1Q3ZLR7 823 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 CCDC158Q5M9N0 1113 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 SYDE1Q6ZW31 735 aaPredicted RBP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 ADGRA1Q86SQ6 560 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 AACSQ86V21 672 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 FAM151AQ8WW52 585 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 CCDC8Q9H0W5 538 aaPredicted RBP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 IL1RAPL2Q9NP60 686 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 PIH1D3Q9NQM4 214 aaKnown RBP8.3□□□□□ -1.08
LINC00349-201ENST00000448748 TNFRSF10DQ9UBN6 386 aa8.3□□□□□ -1.08
LINC00349-201ENST00000448748 SALL3Q9BXA9 1300 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 TCP10L2B9ZVM9 353 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 UBE2Q2LH0YL09 131 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 FOXN1O15353 648 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 CA12O43570 354 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 ENTPD3O75355 529 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 GSTM1P09488 218 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 ZBTB48P10074 688 aaPredicted RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 HDAC1Q13547 482 aaPredicted RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 PKN1Q16512 942 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 TTC39AQ5SRH9 613 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 GORABQ5T7V8 394 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 HEATR6Q6AI08 1181 aaKnown RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 DZIP1Q86YF9 867 aaKnown RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 IRF2BP1Q8IU81 584 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 CLASRPQ8N2M8 674 aaKnown RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 ADCY4Q8NFM4 1077 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 PLCD4Q9BRC7 762 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 KLHL25Q9H0H3 589 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 DDX4Q9NQI0 724 aaKnown RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 SAGE1Q9NXZ1 904 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 WHRNQ9P202 907 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 ABCF2Q9UG63 623 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 ZNF112Q9UJU3 913 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 FZD1Q9UP38 647 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 SF3B6Q9Y3B4 125 aaKnown RBP8.29□□□□□ -1.08
LINC00349-201ENST00000448748 LOC285556D6RIA3 1793 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 CASP8AP2Q9UKL3 1982 aa8.29□□□□□ -1.08
LINC00349-201ENST00000448748 EPHX1P07099 455 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 HSPA8P11142 646 aaKnown RBP8.28□□□□□ -1.08
LINC00349-201ENST00000448748 ATP5JP18859 108 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 BTDP43251 543 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 TM4SF4P48230 202 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 GSTO1P78417 241 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 HSF5Q4G112 596 aaPredicted RBP8.28□□□□□ -1.08
LINC00349-201ENST00000448748 ARMC9Q7Z3E5 817 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 ZFPM1Q8IX07 1006 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 TMEM52Q8NDY8 209 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 CLMNQ96JQ2 1002 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 FGD4Q96M96 766 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 LRRCC1Q9C099 1032 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 TMOD2Q9NZR1 351 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 MRVI1Q9Y6F6 885 aa8.28□□□□□ -1.08
LINC00349-201ENST00000448748 TCRBV5S4A2TA0A5A2 114 aa8.27□□□□□ -1.09
LINC00349-201ENST00000448748 CTCFP49711 727 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms