RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SMC2O95347 1197 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 GAP43P17677 238 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 GPC3P51654 580 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 NLRP11P59045 1033 aaKnown RBP19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 MRPS6P82932 125 aaKnown RBP19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 MXD4Q14582 209 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 KIZQ2M2Z5 673 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 ODR4Q5SWX8 454 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 ISM2Q6H9L7 571 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 RSPH3Q86UC2 560 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 TOX2Q96NM4 488 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 FGFBP2Q9BYJ0 223 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 CDHR5Q9HBB8 845 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 GINS2Q9Y248 185 aa19.88■□□□□ 0.77
TRAPPC4-203ENST00000447216 ADGRA3Q8IWK6 1321 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 A0A087WZ62 844 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 SLC16A4O15374 487 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 ASAP2O43150 1006 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 GPR32O75388 356 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 NMT1P30419 496 aaKnown RBP19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 NPTX2P47972 431 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 DMP1Q13316 513 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 NME8Q8N427 588 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 RNF149Q8NC42 400 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 GLIS3Q8NEA6 775 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 SPATA20Q8TB22 786 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 NLRP7Q8WX94 980 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 SYAP1Q96A49 352 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 SCLT1Q96NL6 688 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 FDXACB1Q9BRP7 624 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 ADAMTS10Q9H324 1103 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 LARSQ9P2J5 1176 aaKnown RBP19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 MAN1B1Q9UKM7 699 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 CDY2AQ9Y6F7 541 aa19.87■□□□□ 0.77
TRAPPC4-203ENST00000447216 CKBP12277 381 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 NAMPTP43490 491 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 SARSP49591 514 aaKnown RBP19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 EHHADHQ08426 723 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 PPP2R5AQ15172 486 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 FAM26FQ5R3K3 315 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 ZNF618Q5T7W0 954 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 RPAINQ86UA6 219 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 TET1Q8NFU7 2136 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 DEPTORQ8TB45 409 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 CCDC47Q96A33 483 aaKnown RBP19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 FIZ1Q96SL8 496 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 KMT5AQ9NQR1 393 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 TRPV2Q9Y5S1 764 aa19.86■□□□□ 0.77
TRAPPC4-203ENST00000447216 UMODL1Q5DID0 1318 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 K7ENM7 598 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 CSDE1O75534 798 aaKnown RBP19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 CHRNA1P02708 482 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 CLTBP09497 229 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 MGAT3Q09327 533 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 TFDP1Q14186 410 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 KCNB1Q14721 858 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 FAM178BQ8IXR5 827 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 SPIRE2Q8WWL2 714 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 GSDMAQ96QA5 445 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 OSMRQ99650 979 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 NOC4LQ9BVI4 516 aaKnown RBP19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 CELF4Q9BZC1 486 aaKnown RBP19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 PPP1R12CQ9BZL4 782 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 MRPL44Q9H9J2 332 aaKnown RBP19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 C17orf75Q9HAS0 396 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 SLC39A2Q9NP94 309 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 TMEM39AQ9NV64 488 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 PCDH10Q9P2E7 1040 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 SEL1LQ9UBV2 794 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 TBX21Q9UL17 535 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 GDAQ9Y2T3 454 aa19.85■□□□□ 0.77
TRAPPC4-203ENST00000447216 M0QZ92 97 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 RHOBTB3O94955 611 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 MYBP10242 640 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 CASP5P51878 434 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 NCKAP1LP55160 1127 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 STK4Q13043 487 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 BFSP2Q13515 415 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 ZC2HC1CQ53FD0 456 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 NT5DC1Q5TFE4 455 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 TRAF7Q6Q0C0 670 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 RBM43Q6ZSC3 357 aaKnown RBP19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 CCDC155Q8N6L0 562 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 CAGE1Q8TC20 777 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 OSBPL7Q9BZF2 842 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 HIPK3Q9H422 1215 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 MINDY3Q9H8M7 445 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 IFT122Q9HBG6 1241 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 PRDM5Q9NQX1 630 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 RMND1Q9NWS8 449 aa19.84■□□□□ 0.77
TRAPPC4-203ENST00000447216 FGFR4P22455 802 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 CYP2C18P33260 490 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 PHKA2P46019 1235 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 SMTNP53814 917 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 PTENP60484 403 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 RBL2Q08999 1139 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 FAM26DQ5JW98 314 aa19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 CDCA2Q69YH5 1023 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC4-203ENST00000447216 HAUS6Q7Z4H7 955 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms