RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 LRRC15Q8TF66 581 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 FTHL17Q9BXU8 183 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 GPRC5CQ9NQ84 441 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 FAM13BQ9NYF5 915 aa20.21■□□□□ 0.83
PHTF1-207ENST00000446739 ZBBXA8MT70 800 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 SRGAP2CP0DJJ0 459 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 GLRA2P23416 452 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 STAT6P42226 847 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 CAPSQ13938 189 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 MCM6Q14566 821 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 TCTN1Q2MV58 587 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 ADALQ6DHV7 355 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 SRGAP1Q7Z6B7 1085 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 FAM228AQ86W67 206 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 CXXC1Q9P0U4 656 aaPredicted RBP20.2■□□□□ 0.82
PHTF1-207ENST00000446739 GBF1Q92538 1859 aa20.2■□□□□ 0.82
PHTF1-207ENST00000446739 LAMA2P24043 3122 aaKnown RBP20.19■□□□□ 0.82
PHTF1-207ENST00000446739 A0A087X0B3 334 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 PHKA2P46019 1235 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 KCNJ6P48051 423 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
PHTF1-207ENST00000446739 PPP2R5AQ15172 486 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 NAALADL2Q58DX5 795 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 GPBP1Q86WP2 473 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 IFNLR1Q8IU57 520 aaPredicted RBP20.19■□□□□ 0.82
PHTF1-207ENST00000446739 PDILTQ8N807 584 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 IFT74Q96LB3 600 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 NFKBIZQ9BYH8 718 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 PANK2Q9BZ23 570 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 ST3GAL5Q9UNP4 418 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 SLC4A7Q9Y6M7 1214 aa20.19■□□□□ 0.82
PHTF1-207ENST00000446739 HIP1RO75146 1068 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 SFPQP23246 707 aaKnown RBP eCLIP20.18■□□□□ 0.82
PHTF1-207ENST00000446739 CMA1P23946 247 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 NAMPTP43490 491 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 PTENP60484 403 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
PHTF1-207ENST00000446739 DHX8Q14562 1220 aaKnown RBP20.18■□□□□ 0.82
PHTF1-207ENST00000446739 IQUBQ8NA54 791 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 PYM1Q9BRP8 204 aaKnown RBP20.18■□□□□ 0.82
PHTF1-207ENST00000446739 CUEDC2Q9H467 287 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 C17orf75Q9HAS0 396 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 GDPD2Q9HCC8 539 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 LAMA3Q16787 3333 aa20.18■□□□□ 0.82
PHTF1-207ENST00000446739 MAPK7Q13164 816 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 PCBP1Q15365 356 aaKnown RBP eCLIP20.17■□□□□ 0.82
PHTF1-207ENST00000446739 LRIT3Q3SXY7 679 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 ARSHQ5FYA8 562 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 SV2BQ7L1I2 683 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 DAW1Q8N136 415 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 PHOSPHO2Q8TCD6 241 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 SLC9A7Q96T83 725 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 ODF2LQ9ULJ1 636 aa20.17■□□□□ 0.82
PHTF1-207ENST00000446739 A0A1W2PQ27 194 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 A0A1W2PQ64 194 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 A0A1W2PQD8 194 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 LRRIQ4A6NIV6 560 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 CSDE1O75534 798 aaKnown RBP20.16■□□□□ 0.82
PHTF1-207ENST00000446739 E2F4Q16254 413 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 ZBTB8OSQ8IWT0 167 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 BSNDQ8WZ55 320 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 DHX58Q96C10 678 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 C2orf40Q9H1Z8 148 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 TMX1Q9H3N1 280 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 KCNG1Q9UIX4 513 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 KCNH3Q9ULD8 1083 aa20.16■□□□□ 0.82
PHTF1-207ENST00000446739 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 RBAK-RBAKDNI3L0D1 243 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 POLR2DO15514 142 aaKnown RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 AMHP03971 560 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 KRT18P05783 430 aaKnown RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 FGFR4P22455 802 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 RAD51AP2Q09MP3 1159 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 DMP1Q13316 513 aaPredicted RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 CSPP1Q1MSJ5 1256 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 CDCA2Q69YH5 1023 aaPredicted RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 CATSPER4Q7RTX7 472 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 DEPTORQ8TB45 409 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 TSPYL2Q9H2G4 693 aaPredicted RBP20.15■□□□□ 0.82
PHTF1-207ENST00000446739 MINDY3Q9H8M7 445 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 MAGEF1Q9HAY2 307 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 POLD4Q9HCU8 107 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 MYO9BQ13459 2157 aa20.15■□□□□ 0.82
PHTF1-207ENST00000446739 NPHP3-ACAD11A0A0J9YXS1 232 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 FAM237AA0A1B0GTK4 181 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.14■□□□□ 0.81
PHTF1-207ENST00000446739 INO80B-WBP1J3KQ70 363 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 ENPP3O14638 875 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 PFKFB1P16118 471 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 ATP2A2P16615 1042 aaKnown RBP20.14■□□□□ 0.81
PHTF1-207ENST00000446739 ZSCAN20P17040 1043 aaPredicted RBP20.14■□□□□ 0.81
PHTF1-207ENST00000446739 PEX3P56589 373 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 MBTD1Q05BQ5 628 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 GIT2Q14161 759 aa20.14■□□□□ 0.81
PHTF1-207ENST00000446739 HABP4Q5JVS0 413 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms