RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MOCS3O95396 460 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 SUPT20HL2P0C7V6 817 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 PNMA6AP0CW24 399 aaPredicted RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 DLG4P78352 724 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 BFSP1Q12934 665 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 ASTE1Q2TB18 679 aaPredicted RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 Q3C1V9 767 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 DPY19L2P1Q6NXN4 242 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 FBXO38Q6PIJ6 1188 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 ZNF662Q6ZS27 426 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 TXNRD2Q9NNW7 524 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 ZNF302Q9NR11 478 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 CYP26B1Q9NR63 512 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 HSPBP1Q9NZL4 362 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 AJAP1Q9UKB5 411 aaPredicted RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 TBX20Q9UMR3 447 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 SBF1O95248 1867 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 DICER1Q9UPY3 1922 aaKnown RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 STBD1O95210 358 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 LCA5LO95447 670 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 KCNA4P22459 653 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 NCKAP1LP55160 1127 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 PTK2Q05397 1052 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 IQCEQ6IPM2 695 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 SRGAP1Q7Z6B7 1085 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC9A9Q8IVB4 645 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 CEP112Q8N8E3 955 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 XXYLT1Q8NBI6 393 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 TMEM161BQ8NDZ6 487 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 GOLGA1Q92805 767 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 KIFAP3Q92845 792 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 SIX2Q9NPC8 291 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 EXOC7Q9UPT5 735 aa10.39□□□□□ -0.75
COL6A4P1-201ENST00000446690 PARP14Q460N5 1801 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 A0A087X0T9 212 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 GTPBP10A4D1E9 387 aaKnown RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 BUB1O43683 1085 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 TACC1O75410 805 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 CNMDO75829 334 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 DGAT1O75907 488 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 FAM228BP0C875 321 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 OSBPP22059 807 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 VAMP7P51809 220 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 MYL7Q01449 175 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 PPIL2Q13356 520 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 PPP2R5AQ15172 486 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 LY6KQ17RY6 165 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 IRF2BP2Q7Z5L9 587 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC10A4Q96EP9 437 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 SAAL1Q96ER3 474 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 CAPZA3Q96KX2 299 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 RBPJLQ9UBG7 517 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 GLTPD2A6NH11 291 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 GFPT2O94808 682 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 UBA1P22314 1058 aaKnown RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 CNGA1P29973 690 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 ICAM3P32942 547 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 GCLMP48507 274 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 TUBB2AQ13885 445 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC18A3Q16572 532 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 XKR3Q5GH77 459 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 INTS8Q75QN2 995 aaKnown RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 FASTKD5Q7L8L6 764 aaKnown RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 TMEM143Q96AN5 459 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 BICD1Q96G01 975 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 IFT74Q96LB3 600 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 TUBB2BQ9BVA1 445 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 MAF1Q9H063 256 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 POLR3FQ9H1D9 316 aaPredicted RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 TAF1DQ9H5J8 278 aaPredicted RBP10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 DNAJC12Q9UKB3 198 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 SAR1BQ9Y6B6 198 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 CAPN6Q9Y6Q1 641 aa10.38□□□□□ -0.75
COL6A4P1-201ENST00000446690 EMSYQ7Z589 1322 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 ATP4AP20648 1035 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 MYBPC2Q14324 1141 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 KCTD2Q14681 263 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 ARHGAP44Q17R89 818 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 WHAMMP3Q1A5X7 153 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 KIAA0753Q2KHM9 967 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 ZNF571Q7Z3V5 609 aaPredicted RBP10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 DNAAF5Q86Y56 855 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 MCPH1Q8NEM0 835 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 TRIM58Q8NG06 486 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 CCDC127Q96BQ5 260 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 MMP19Q99542 508 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 INTS2Q9H0H0 1204 aaKnown RBP10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 ST6GALNAC4Q9H4F1 302 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 LUC7LQ9NQ29 371 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms