RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RETREG2Q8NC44 543 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 SLC7A3Q8WY07 619 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 PAGE5Q96GU1 130 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 FAM49AQ9H0Q0 323 aaPredicted RBP19.1■□□□□ 0.65
LIME1-202ENST00000444951 ATP6V0A4Q9HBG4 840 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 PRRC2BQ5JSZ5 2229 aaKnown RBP19.09■□□□□ 0.65
LIME1-202ENST00000444951 EPOPA6NHQ4 379 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 MYMKA6NI61 221 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 RFXAPO00287 272 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 MAFO75444 373 aaPredicted RBP19.09■□□□□ 0.65
LIME1-202ENST00000444951 CA3P07451 260 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 CYP11B2P19099 503 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 RFC2P35250 354 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 RFC5P40937 340 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 CLCN3P51790 818 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 NFKBIBQ15653 356 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 FAM102BQ5T8I3 360 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 EFCAB12Q6NXP0 572 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 RUFY4Q6ZNE9 571 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 SPRED2Q7Z698 418 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 WNT8BQ93098 351 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 CEP89Q96ST8 783 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 MTRQ99707 1265 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 BLZF1Q9H2G9 400 aa19.09■□□□□ 0.65
LIME1-202ENST00000444951 MAGEB2O15479 319 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 DGAT1O75907 488 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 MBD3O95983 291 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 BFSP2Q13515 415 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 CAMK4Q16566 473 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 ARSHQ5FYA8 562 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 TJAP1Q5JTD0 557 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 C1orf186Q6ZWK4 172 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 TNMDQ9H2S6 317 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 ZHX3Q9H4I2 956 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 DHX33Q9H6R0 707 aaKnown RBP19.08■□□□□ 0.64
LIME1-202ENST00000444951 CERS4Q9HA82 394 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 MAGEF1Q9HAY2 307 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 GPRC5CQ9NQ84 441 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 KBTBD4Q9NVX7 518 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 LOXHD1Q8IVV2 1947 aa19.08■□□□□ 0.64
LIME1-202ENST00000444951 KAT6AQ92794 2004 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 HIP1RO75146 1068 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 PRR29P0C7W0 189 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 PTMSP20962 102 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 AMPD3Q01432 767 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 DRP2Q13474 957 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 TMCO2Q7Z6W1 182 aaPredicted RBP19.07■□□□□ 0.64
LIME1-202ENST00000444951 DDX12PQ92771 950 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 CCDC34Q96HJ3 373 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 PPP1R16BQ96T49 567 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 REEP2Q9BRK0 252 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 AKT3Q9Y243 479 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 PPME1Q9Y570 386 aa19.07■□□□□ 0.64
LIME1-202ENST00000444951 SFI1A8K8P3 1242 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 ACTN1P12814 892 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 IDEP14735 1019 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 HOXC8P31273 242 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 DNM2P50570 870 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 ASIC1P78348 528 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 ADAM17P78536 824 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 TMEM62Q0P6H9 643 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 CUL4BQ13620 913 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 TRIM71Q2Q1W2 868 aaKnown RBP19.06■□□□□ 0.64
LIME1-202ENST00000444951 KANK3Q6NY19 840 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 TRAF7Q6Q0C0 670 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 LRRC8DQ7L1W4 858 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 HERC6Q8IVU3 1022 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 EXOC8Q8IYI6 725 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 MICALL1Q8N3F8 863 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 MCPH1Q8NEM0 835 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 CAGE1Q8TC20 777 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 DNAJB3Q8WWF6 145 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 ERCC4Q92889 916 aaPredicted RBP19.06■□□□□ 0.64
LIME1-202ENST00000444951 ZNF668Q96K58 619 aaPredicted RBP19.06■□□□□ 0.64
LIME1-202ENST00000444951 TIGD1Q96MW7 591 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 SLC9A7Q96T83 725 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 JPH2Q9BR39 696 aaPredicted RBP19.06■□□□□ 0.64
LIME1-202ENST00000444951 LRRC27Q9C0I9 530 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 POLR3FQ9H1D9 316 aaPredicted RBP19.06■□□□□ 0.64
LIME1-202ENST00000444951 THEGQ9P2T0 379 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 PCDHA2Q9Y5H9 948 aa19.06■□□□□ 0.64
LIME1-202ENST00000444951 MBLAC1A4D2B0 266 aaPredicted RBP19.05■□□□□ 0.64
LIME1-202ENST00000444951 RSPH10B2B2RC85 870 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 NBNO60934 754 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 TBCAO75347 108 aaKnown RBP19.05■□□□□ 0.64
LIME1-202ENST00000444951 VTNP04004 478 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 RSPH10BP0C881 870 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 CKBP12277 381 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 SELPP16109 830 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 TMOD1P28289 359 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 RBL2Q08999 1139 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 MKRN4PQ13434 485 aaPredicted RBP19.05■□□□□ 0.64
LIME1-202ENST00000444951 PNOCQ13519 176 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 GIT2Q14161 759 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 TRIM9Q9C026 710 aa19.05■□□□□ 0.64
LIME1-202ENST00000444951 SUCLA2Q9P2R7 463 aaPredicted RBP19.05■□□□□ 0.64
LIME1-202ENST00000444951 IGKV6-21A0A0C4DH24 114 aa19.04■□□□□ 0.64
LIME1-202ENST00000444951 LCHNA4D1U4 455 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms