RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 POLLQ9UGP5 575 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 PJA2O43164 708 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 CYP26A1O43174 497 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 MARCKSL1P49006 195 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 ATG4AQ8WYN0 398 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 POP1Q99575 1024 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 PLVAPQ9BX97 442 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 TDRD3Q9H7E2 651 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 CLDN3O15551 220 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 TRIM37O94972 964 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 HNRNPH3P31942 346 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 SKOR1P84550 965 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 ZBTB16Q05516 673 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 TMED2Q15363 201 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 C9orf72Q96LT7 481 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 STMN4Q9H169 189 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 RIOX1Q9H6W3 641 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 GPR75-ASB3A0A0A6YYF3 556 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 SHOX2O60902 331 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 SPAG7O75391 227 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 SCTRP47872 440 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 FMO5P49326 533 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 ZNF131P52739 623 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 CCDC6Q16204 474 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 TBC1D16Q8TBP0 767 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 SPIRE2Q8WWL2 714 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 KRT35Q92764 455 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 NAP1L4Q99733 375 aaKnown RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 DONSONQ9NYP3 566 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 NID2Q14112 1375 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 PPP4R3AQ6IN85 833 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 KCNV1Q6PIU1 500 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 PALB2Q86YC2 1186 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 SUGP1Q8IWZ8 645 aaKnown RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 ERP44Q9BS26 406 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 TCHPQ9BT92 498 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 AJAP1Q9UKB5 411 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-203ENST00000444191 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 M0R2N6 131 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 MYBL1P10243 752 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 BMP3P12645 472 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 COMTP21964 271 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 PCK1P35558 622 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 PEX3P56589 373 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 KYNUQ16719 465 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 TMC3Q7Z5M5 1100 aa12.54□□□□□ -0.4
HCFC1-203ENST00000444191 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
HCFC1-203ENST00000444191 FAM86B1E9PN63 330 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 GOLGA8SH3BPF8 625 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 GOLGA8MH3BSY2 632 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 ECEL1O95672 775 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 FAM86B2P0C5J1 330 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 TNNI1P19237 187 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 IRF2BP2Q7Z5L9 587 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 KAT5Q92993 513 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
HCFC1-203ENST00000444191 LMTK3Q96Q04 1460 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 F8VZ95 297 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 EML1O00423 815 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 ALAS1P13196 640 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 MXI1P50539 228 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 SLC35C1Q96A29 364 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 ERVK-5Q9HDB9 667 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 KCNQ5Q9NR82 932 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
HCFC1-203ENST00000444191 ANAPC7Q9UJX3 599 aa12.53□□□□□ -0.4
HCFC1-203ENST00000444191 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
HCFC1-203ENST00000444191 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
HCFC1-203ENST00000444191 PDXKO00764 312 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms