RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SMC3Q9UQE7 1217 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 PCDHB12Q9Y5F1 795 aa15.67■□□□□ 0.1
TREX1-202ENST00000444177 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 IRS1P35568 1242 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 CDC42EP1Q00587 391 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 DLX2Q07687 328 aaPredicted RBP15.66■□□□□ 0.1
TREX1-202ENST00000444177 ADAM15Q13444 863 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 DRP2Q13474 957 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 CTTNQ14247 550 aaKnown RBP15.66■□□□□ 0.1
TREX1-202ENST00000444177 ZNF174Q15697 407 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 MCTP1Q6DN14 999 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 ANO5Q75V66 913 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 NLRP7Q8WX94 980 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 MTMR9Q96QG7 549 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 AAASQ9NRG9 546 aa15.66■□□□□ 0.1
TREX1-202ENST00000444177 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.66■□□□□ 0.1
TREX1-202ENST00000444177 POTEMA6NI47 508 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 H3BQV1 296 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 LINC01565O15544 149 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 OR52Z1P0C646 297 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 FGFR4P22455 802 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 YWHABP31946 246 aaKnown RBP15.65■□□□□ 0.1
TREX1-202ENST00000444177 DNM2P50570 870 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 NPEPPSP55786 919 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 ORC2Q13416 577 aaPredicted RBP15.65■□□□□ 0.1
TREX1-202ENST00000444177 NBR1Q14596 966 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 ECHDC2Q86YB7 292 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 TPH2Q8IWU9 490 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 C4orf19Q8IY42 314 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 PPP2R3CQ969Q6 453 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 CEP170P1Q96L14 293 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 EIF2AK1Q9BQI3 630 aaKnown RBP15.65■□□□□ 0.1
TREX1-202ENST00000444177 TMEM117Q9H0C3 514 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 CWH43Q9H720 699 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 ZSWIM4Q9H7M6 989 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 CYP26B1Q9NR63 512 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 BMP2KQ9NSY1 1161 aaPredicted RBP15.65■□□□□ 0.1
TREX1-202ENST00000444177 HCSTQ9UBK5 93 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 FAM50BQ9Y247 325 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 ARID2Q68CP9 1835 aa15.65■□□□□ 0.1
TREX1-202ENST00000444177 PI4K2BG5E9Z4 385 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 HOXA2O43364 376 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 MAFO75444 373 aaPredicted RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 FGF18O76093 207 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 U2AF2P26368 475 aaKnown RBP eCLIP15.64■□□□□ 0.09
TREX1-202ENST00000444177 SSTR3P32745 418 aaPredicted RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 TRAPPC10P48553 1259 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 POLGP54098 1239 aaPredicted RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 UBE3AQ05086 875 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 CLUL1Q15846 466 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 LRRC55Q6ZSA7 311 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 ADGRD2Q7Z7M1 963 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 COLGALT1Q8NBJ5 622 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 MICAL1Q8TDZ2 1067 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 SLC7A3Q8WY07 619 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 CCDC43Q96MW1 224 aaKnown RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 CASD1Q96PB1 797 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 JPH2Q9BR39 696 aaPredicted RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 GCOM2Q9BZD3 368 aaPredicted RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 RNF19AQ9NV58 838 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 SUCLA2Q9P2R7 463 aaPredicted RBP15.64■□□□□ 0.09
TREX1-202ENST00000444177 RAPGEFL1Q9UHV5 662 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 PCDHGC5Q9Y5F6 944 aa15.64■□□□□ 0.09
TREX1-202ENST00000444177 FNDC1Q4ZHG4 1894 aaPredicted RBP15.63■□□□□ 0.09
TREX1-202ENST00000444177 ATG2AQ2TAZ0 1938 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 A0A087WZ62 844 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 A0A0U1RQF3 1178 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 NRIP1P48552 1158 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 ERVFC1P60507 584 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 XKR9Q5GH70 373 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 OTUD6AQ7L8S5 288 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 RBM23Q86U06 439 aaKnown RBP15.63■□□□□ 0.09
TREX1-202ENST00000444177 THNSL1Q8IYQ7 743 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 EFHBQ8N7U6 833 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
TREX1-202ENST00000444177 RNF169Q8NCN4 708 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 FDXACB1Q9BRP7 624 aaPredicted RBP15.63■□□□□ 0.09
TREX1-202ENST00000444177 LRFN3Q9BTN0 628 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 CHST12Q9NRB3 414 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 PRKAG3Q9UGI9 489 aa15.63■□□□□ 0.09
TREX1-202ENST00000444177 KIAA1671Q9BY89 1806 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 MBTPS2O43462 519 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 TBX10O75333 385 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 SLITRK3O94933 977 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 EOMESO95936 686 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 LAG3P18627 525 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 RFC5P40937 340 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 TECP42680 631 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 ZP2Q05996 745 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 TMEM31Q5JXX7 168 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 ZNF598Q86UK7 904 aaKnown RBP15.62■□□□□ 0.09
TREX1-202ENST00000444177 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 ABI1Q8IZP0 508 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 NLRP4Q96MN2 994 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 TLE6Q9H808 572 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 TLR9Q9NR96 1032 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 DACT1Q9NYF0 836 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 CLEC1BQ9P126 229 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms