RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 FNDC1Q4ZHG4 1894 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 KIAA1671Q9BY89 1806 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 GAS2O43903 313 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 QARSP47897 775 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 RAB27AP51159 221 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 CLUL1Q15846 466 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 LETM2Q2VYF4 491 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 SPG21Q9NZD8 308 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 SUCLA2Q9P2R7 463 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 ATG2AQ2TAZ0 1938 aa18.31■□□□□ 0.52
CTDSP1-204ENST00000443891 ZNF623O75123 536 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 GLP2RO95838 553 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 ERVFC1P60507 584 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 CBX2Q14781 532 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 LRRC55Q6ZSA7 311 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 ANO5Q75V66 913 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 RBM23Q86U06 439 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 SLFN12Q8IYM2 578 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 SLC7A3Q8WY07 619 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 GJA10Q969M2 543 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 CYP26B1Q9NR63 512 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 STK39Q9UEW8 545 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 KCNJ14Q9UNX9 436 aa18.3■□□□□ 0.52
CTDSP1-204ENST00000443891 FAM86C2PA6NEL3 165 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 SLC37A4O43826 429 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 CSPG5O95196 566 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 HOXB8P17481 243 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 RFC5P40937 340 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 PHKA2P46019 1235 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 KCNC3Q14003 757 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 PCBP1Q15365 356 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■■■■ 43
CTDSP1-204ENST00000443891 EPHA7Q15375 998 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 CLLU1OSQ5K130 101 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 OTUD6AQ7L8S5 288 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 C4orf19Q8IY42 314 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 TCF25Q9BQ70 676 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 PHF7Q9BWX1 381 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 BRMS1Q9HCU9 246 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 VAV3Q9UKW4 847 aa18.29■□□□□ 0.52
CTDSP1-204ENST00000443891 A0A087WZ62 844 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 LOC730098B7Z3J9 87 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 ASAP2O43150 1006 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 ALDH7A1P49419 539 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 DRP2Q13474 957 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 RHPN2Q8IUC4 686 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 RNF135Q8IUD6 432 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 SLC39A11Q8N1S5 342 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 SUSD6Q92537 303 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 FDXACB1Q9BRP7 624 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 DHX33Q9H6R0 707 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 ENTPD7Q9NQZ7 604 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 TPCN1Q9ULQ1 816 aa18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 BARX2Q9UMQ3 279 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 USP15Q9Y4E8 981 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-204ENST00000443891 WDR81Q562E7 1941 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 EML1O00423 815 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 MARCH6O60337 910 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 CCNT1O60563 726 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 GIT2Q14161 759 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 GLB1LQ6UWU2 654 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 TMC7Q7Z402 723 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 RNF169Q8NCN4 708 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 TCP11Q8WWU5 503 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 PGBD4Q96DM1 585 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 ZNF668Q96K58 619 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 CEP170P1Q96L14 293 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 ORC3Q9UBD5 711 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 HCSTQ9UBK5 93 aa18.27■□□□□ 0.52
CTDSP1-204ENST00000443891 PLXNA4Q9HCM2 1894 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PER2O15055 1255 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 FGFR4P22455 802 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 POLGP54098 1239 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PLPP4Q5VZY2 271 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 CATSPER4Q7RTX7 472 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 MRPL43Q8N983 215 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 HELQQ8TDG4 1101 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PSPC1Q8WXF1 523 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 EDAQ92838 391 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 HAS1Q92839 578 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 CASP10Q92851 521 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 TMEM169Q96HH4 297 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 MFSD14AQ96MC6 490 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 ZSWIM4Q9H7M6 989 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PIN4Q9Y237 131 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 COL4A3BPQ9Y5P4 624 aa18.26■□□□□ 0.51
CTDSP1-204ENST00000443891 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
CTDSP1-204ENST00000443891 KRT2P35908 639 aa18.25■□□□□ 0.51
CTDSP1-204ENST00000443891 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms