RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 LENG1Q96BZ8 264 aaPredicted RBP10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 ACCSQ96QU6 501 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 CEP89Q96ST8 783 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 STRA6Q9BX79 667 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 RNPEPQ9H4A4 650 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 ST6GALNAC4Q9H4F1 302 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 TUT1Q9H6E5 874 aaKnown RBP10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 SUGCTQ9HAC7 445 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 IMPACTQ9P2X3 320 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 KCNG1Q9UIX4 513 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 GNEQ9Y223 722 aaKnown RBP10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 DENND3A2RUS2 1198 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 LGALS16A8MUM7 142 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 CLIC2O15247 247 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 TEX33O43247 280 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 TGFB1I1O43294 461 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 GAS2O43903 313 aaKnown RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 GSDMDP57764 484 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 IGBP1P78318 339 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 GTF2BQ00403 316 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 UBXN1Q04323 297 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 BRDTQ58F21 947 aaPredicted RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 TRAPPC12Q8WVT3 735 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 TRIB2Q92519 343 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 JPH2Q9BR39 696 aaPredicted RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 NTPCRQ9BSD7 190 aaKnown RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 C16orf70Q9BSU1 422 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 AP5M1Q9H0R1 490 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 IKZF4Q9H2S9 585 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 EXOC7Q9UPT5 735 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 BRCA2P51587 3418 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 LRRIQ4A6NIV6 560 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 A6NJR5 290 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZBTB42B2RXF5 422 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 H0YCG3 227 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 IGHA2P01877 340 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 AKR1A1P14550 325 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 MSNP26038 577 aaKnown RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 ABCD1P33897 745 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 ARL2P36404 184 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 CPT1AP50416 773 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 CEP135Q66GS9 1140 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 DEPTORQ8TB45 409 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 TCP11Q8WWU5 503 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 HVCN1Q96D96 273 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 AGPAT3Q9NRZ7 376 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 TBX20Q9UMR3 447 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 CASP8AP2Q9UKL3 1982 aa10.43□□□□□ -0.74
SMPD4P1-203ENST00000443839 EPB41P11171 864 aaKnown RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 INSRRP14616 1297 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 GLRA2P23416 452 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 HOXD10P28358 340 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 CNGA1P29973 690 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 NAMPTP43490 491 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 DNM2P50570 870 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 CHMP4BP1P59074 171 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 MAN2A1Q16706 1144 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZNF484Q5JVG2 852 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 FKBP15Q5T1M5 1219 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 LRRC71Q8N4P6 559 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 METTL13Q8N6R0 699 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 RETREG2Q8NC44 543 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 ASAP3Q8TDY4 903 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 PSPC1Q8WXF1 523 aaKnown RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZNF830Q96NB3 372 aaPredicted RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 ADGRA3Q8IWK6 1321 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 KAT6AQ92794 2004 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 CYP2J2P51589 502 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 CAP1Q01518 475 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 STRN3Q13033 797 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 DRP2Q13474 957 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 MXD4Q14582 209 aaPredicted RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 NFIL3Q16649 462 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 VWA3BQ502W6 1294 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 IER5Q5VY09 327 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 MAP4K3Q8IVH8 894 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 CD99L2Q8TCZ2 262 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 PRPF31Q8WWY3 499 aaKnown RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 PKNOX2Q96KN3 472 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 CGNQ9P2M7 1197 aaKnown RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 ARHGAP28Q9P2N2 729 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 ARMCX3Q9UH62 379 aaPredicted RBP10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 FRMD4BQ9Y2L6 1034 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 Q9Y3F1 56 aa10.42□□□□□ -0.74
SMPD4P1-203ENST00000443839 GPR25O00155 361 aa10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 HNRNPDLO14979 420 aaKnown RBP10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 SLC16A3O15427 465 aaKnown RBP10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZNF500O60304 480 aaPredicted RBP10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 EXOC3O60645 756 aa10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 AKAP3O75969 853 aa10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 CYBAP13498 195 aa10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 SCP2P22307 547 aa10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 SFPQP23246 707 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 BRD2P25440 801 aaKnown RBP10.41□□□□□ -0.74
SMPD4P1-203ENST00000443839 PSMC2P35998 433 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms