RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SRGAP2CP0DJJ0 459 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 EMC2Q15006 297 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 CATSPER4Q7RTX7 472 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 ECHDC2Q86YB7 292 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 TCP11Q8WWU5 503 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 PRPF31Q8WWY3 499 aaKnown RBP22.42■■□□□ 1.18
LRCH3-208ENST00000443727 MTMR9Q96QG7 549 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 TMEM117Q9H0C3 514 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 DHX33Q9H6R0 707 aaKnown RBP22.42■■□□□ 1.18
LRCH3-208ENST00000443727 CHST12Q9NRB3 414 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 TYW1Q9NV66 732 aaKnown RBP22.42■■□□□ 1.18
LRCH3-208ENST00000443727 PIN4Q9Y237 131 aaKnown RBP22.42■■□□□ 1.18
LRCH3-208ENST00000443727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.41■■□□□ 1.18
LRCH3-208ENST00000443727 GAS2O43903 313 aaKnown RBP22.41■■□□□ 1.18
LRCH3-208ENST00000443727 ZNF174Q15697 407 aa22.41■■□□□ 1.18
LRCH3-208ENST00000443727 TWF2Q6IBS0 349 aaKnown RBP22.41■■□□□ 1.18
LRCH3-208ENST00000443727 PPP2R3CQ969Q6 453 aa22.41■■□□□ 1.18
LRCH3-208ENST00000443727 NECAB3Q96P71 396 aaPredicted RBP22.41■■□□□ 1.18
LRCH3-208ENST00000443727 HSD17B14Q9BPX1 270 aa22.41■■□□□ 1.18
LRCH3-208ENST00000443727 TMEM60Q9H2L4 133 aa22.41■■□□□ 1.18
LRCH3-208ENST00000443727 NOL7Q9UMY1 257 aaKnown RBP22.41■■□□□ 1.18
LRCH3-208ENST00000443727 XIRP2A4UGR9 3374 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 A0A0U1RQF3 1178 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 NCK2O43639 380 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 LAMTOR4Q0VGL1 99 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 NOSTRINQ8IVI9 506 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 THNSL1Q8IYQ7 743 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 SPPL3Q8TCT6 385 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 MTRQ99707 1265 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 KIF3AQ9Y496 699 aa22.4■■□□□ 1.18
LRCH3-208ENST00000443727 SPTBN5Q9NRC6 3674 aaKnown RBP22.4■■□□□ 1.18
LRCH3-208ENST00000443727 POTEMA6NI47 508 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 LYPLA2O95372 231 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 EOMESO95936 686 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 LAG3P18627 525 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 ORC2Q13416 577 aaPredicted RBP22.39■■□□□ 1.17
LRCH3-208ENST00000443727 CSPP1Q1MSJ5 1256 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 TTC38Q5R3I4 469 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 LRRC43Q8N309 656 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 POF1BQ8WVV4 589 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 PABPC5Q96DU9 382 aaKnown RBP22.39■■□□□ 1.17
LRCH3-208ENST00000443727 IGFLR1Q9H665 355 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 ANKEF1Q9NU02 776 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 CLDND1Q9NY35 253 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 BRWD1Q9NSI6 2320 aa22.39■■□□□ 1.17
LRCH3-208ENST00000443727 ASAP2O43150 1006 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 OR52Z1P0C646 297 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 SKIP12755 728 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 LEXMQ3ZCV2 418 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 SRGAP1Q7Z6B7 1085 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 FERMT3Q86UX7 667 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 COLGALT1Q8NBJ5 622 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 ERMNQ8TAM6 284 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 MICAL1Q8TDZ2 1067 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 CASD1Q96PB1 797 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 IFT122Q9HBG6 1241 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 HCSTQ9UBK5 93 aa22.38■■□□□ 1.17
LRCH3-208ENST00000443727 TCF20Q9UGU0 1960 aaKnown RBP22.38■■□□□ 1.17
LRCH3-208ENST00000443727 MYO7AQ13402 2215 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 H3BQ06 376 aaPredicted RBP22.37■■□□□ 1.17
LRCH3-208ENST00000443727 FGF18O76093 207 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 DNAJB1P25685 340 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 TECP42680 631 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 PHKA2P46019 1235 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 CAMK1Q14012 370 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 RNF149Q8NC42 400 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 HELQQ8TDG4 1101 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 PIGOQ8TEQ8 1089 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 RNF19AQ9NV58 838 aa22.37■■□□□ 1.17
LRCH3-208ENST00000443727 DGAT1O75907 488 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 TRAPPC10P48553 1259 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 RAB27AP51159 221 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 UBE3AQ05086 875 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 HYAL1Q12794 435 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 TFDP1Q14186 410 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 MXD4Q14582 209 aaPredicted RBP22.36■■□□□ 1.17
LRCH3-208ENST00000443727 LONRF3Q496Y0 759 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 CLLU1OSQ5K130 101 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 PTCRAQ6ISU1 281 aaPredicted RBP22.36■■□□□ 1.17
LRCH3-208ENST00000443727 ZNF598Q86UK7 904 aaKnown RBP22.36■■□□□ 1.17
LRCH3-208ENST00000443727 MRPL9Q9BYD2 267 aaKnown RBP22.36■■□□□ 1.17
LRCH3-208ENST00000443727 CWH43Q9H720 699 aa22.36■■□□□ 1.17
LRCH3-208ENST00000443727 A0A087WWV3 80 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 IRS1P35568 1242 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 PUS10Q3MIT2 529 aaKnown RBP22.35■■□□□ 1.17
LRCH3-208ENST00000443727 LRRC55Q6ZSA7 311 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 TMX3Q96JJ7 454 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 ZNF558Q96NG5 402 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 TRAIPQ9BWF2 469 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 TUFT1Q9NNX1 390 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 AGPAT5Q9NUQ2 364 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 FAM105AQ9NUU6 356 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 PUF60Q9UHX1 559 aaKnown RBP22.35■■□□□ 1.17
LRCH3-208ENST00000443727 NCOR1O75376 2440 aa22.35■■□□□ 1.17
LRCH3-208ENST00000443727 FNDC1Q4ZHG4 1894 aaPredicted RBP22.34■■□□□ 1.17
LRCH3-208ENST00000443727 KIAA1671Q9BY89 1806 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 ERLIN2O94905 339 aa22.34■■□□□ 1.17
LRCH3-208ENST00000443727 XRCC6P12956 609 aaKnown RBP eCLIP22.34■■□□□ 1.17
LRCH3-208ENST00000443727 ATF7P17544 494 aaPredicted RBP22.34■■□□□ 1.17
LRCH3-208ENST00000443727 PPM1AP35813 382 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms