RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MTFR1LQ9H019 292 aa6.56□□□□□ -1.36
VPS50-206ENST00000443443 ZNF891A8MT65 544 aaPredicted RBP6.55□□□□□ -1.36
VPS50-206ENST00000443443 CAPN14A8MX76 684 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 PLSCR1O15162 318 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 PPM1GO15355 546 aaPredicted RBP6.55□□□□□ -1.36
VPS50-206ENST00000443443 MYBPC3Q14896 1274 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 PCBP1Q15365 356 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-206ENST00000443443 KIF18BQ86Y91 864 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 Q8N1X5 172 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 PLA2G15Q8NCC3 412 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 POLR3BQ9NW08 1133 aaPredicted RBP6.55□□□□□ -1.36
VPS50-206ENST00000443443 NCDNQ9UBB6 729 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 RCAN3Q9UKA8 241 aa6.55□□□□□ -1.36
VPS50-206ENST00000443443 PMS2P1A4D2B8 440 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 NPIPB8E9PQR5 432 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 KPNA1P52294 538 aaPredicted RBP6.54□□□□□ -1.36
VPS50-206ENST00000443443 SAFB2Q14151 953 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS50-206ENST00000443443 UNQ6494/PRO21346Q6UXR6 183 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 GAREM2Q75VX8 874 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 BMP8AQ7Z5Y6 402 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 THEMISQ8N1K5 641 aaPredicted RBP6.54□□□□□ -1.36
VPS50-206ENST00000443443 GPR101Q96P66 508 aaPredicted RBP6.54□□□□□ -1.36
VPS50-206ENST00000443443 PLEKHG4BQ96PX9 1271 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 MTG2Q9H4K7 406 aa6.54□□□□□ -1.36
VPS50-206ENST00000443443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS50-206ENST00000443443 UBE2QL1A1L167 161 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 HNRNPLP14866 589 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS50-206ENST00000443443 CD40P25942 277 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 CANXP27824 592 aaKnown RBP6.53□□□□□ -1.36
VPS50-206ENST00000443443 CREB3L3Q68CJ9 461 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 GSPT2Q8IYD1 628 aaKnown RBP6.53□□□□□ -1.36
VPS50-206ENST00000443443 AHI1Q8N157 1196 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 NKD2Q969F2 451 aaPredicted RBP6.53□□□□□ -1.36
VPS50-206ENST00000443443 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 ORAI3Q9BRQ5 295 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 NOL10Q9BSC4 688 aaKnown RBP6.53□□□□□ -1.36
VPS50-206ENST00000443443 GIT1Q9Y2X7 761 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 SH3BP1Q9Y3L3 701 aa6.53□□□□□ -1.36
VPS50-206ENST00000443443 TOX4O94842 621 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 PCDH8O95206 1070 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 POU3F2P20265 443 aaPredicted RBP6.52□□□□□ -1.37
VPS50-206ENST00000443443 ACRV1P26436 265 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 DGCR2P98153 550 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 DSG1Q02413 1049 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 CRHR2Q13324 411 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 LSM12Q3MHD2 195 aaKnown RBP6.52□□□□□ -1.37
VPS50-206ENST00000443443 KIAA1841Q6NSI8 718 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 FAM111BQ6SJ93 734 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 CLEC14AQ86T13 490 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 EFHBQ8N7U6 833 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 MPHOSPH9Q99550 1183 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 FEZ1Q99689 392 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 TCF25Q9BQ70 676 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 TARS2Q9BW92 718 aaKnown RBP6.52□□□□□ -1.37
VPS50-206ENST00000443443 MSRAQ9UJ68 235 aa6.52□□□□□ -1.37
VPS50-206ENST00000443443 A0A0A6YYJ9 748 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 CYP27B1O15528 508 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 ACVRL1P37023 503 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 IL2P60568 153 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
VPS50-206ENST00000443443 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 KANSL1Q7Z3B3 1105 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 JAZF1Q86VZ6 243 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 PPM1KQ8N3J5 372 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 IL17DQ8TAD2 202 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 ZNF503Q96F45 646 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 HIST1H2AHQ96KK5 128 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 SORCS2Q96PQ0 1159 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 UIMC1Q96RL1 719 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 HIST1H2AJQ99878 128 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 ZMAT4Q9H898 229 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 USP18Q9UMW8 372 aa6.51□□□□□ -1.37
VPS50-206ENST00000443443 FAM83GA6ND36 823 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 CYR61O00622 381 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 JUNP05412 331 aaKnown RBP6.5□□□□□ -1.37
VPS50-206ENST00000443443 VSIG10L2P0DP72 767 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 HMGA2P52926 109 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 SMAD3P84022 425 aaKnown RBP6.5□□□□□ -1.37
VPS50-206ENST00000443443 OCRLQ01968 901 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 PTH1RQ03431 593 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 LRRC32Q14392 662 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 MAN2A1Q16706 1144 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 DALRD3Q5D0E6 543 aaKnown RBP6.5□□□□□ -1.37
VPS50-206ENST00000443443 MIIPQ5JXC2 388 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 ESPNLQ6ZVH7 1005 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 ANKRD35Q8N283 1001 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 OR2W6PQ8NHA6 318 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 LEO1Q8WVC0 666 aaPredicted RBP6.5□□□□□ -1.37
VPS50-206ENST00000443443 FERMT2Q96AC1 680 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 ARL8AQ96BM9 186 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 MFSD3Q96ES6 412 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 ZNF496Q96IT1 587 aaPredicted RBP6.5□□□□□ -1.37
VPS50-206ENST00000443443 MRIQ9BWK5 157 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 IL23AQ9NPF7 189 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 PLAAQ9Y263 795 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 MYPNQ86TC9 1320 aa6.5□□□□□ -1.37
VPS50-206ENST00000443443 ST20-MTHFSA0A0A6YYL1 179 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 OPHN1O60890 802 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 RAB11FIP3O75154 756 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 FSBPO95073 299 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms