RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 POTEGQ6S5H5 508 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 ABI1Q8IZP0 508 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 BACH2Q9BYV9 841 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 DACT1Q9NYF0 836 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.47■■□□□ 1.35
CDKN3-204ENST00000442975 PCDHB6Q9Y5E3 794 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 XIRP2A4UGR9 3374 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 EVPLQ92817 2033 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 GRM6O15303 877 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 USO1O60763 962 aaKnown RBP23.46■■□□□ 1.35
CDKN3-204ENST00000442975 MED24O75448 989 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 RARRES1P49788 294 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 TWF2Q6IBS0 349 aaKnown RBP23.46■■□□□ 1.35
CDKN3-204ENST00000442975 CATSPER3Q86XQ3 398 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 ECHDC2Q86YB7 292 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 RNF149Q8NC42 400 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 ASB2Q96Q27 587 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 PLVAPQ9BX97 442 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 ELAC1Q9H777 363 aaKnown RBP23.46■■□□□ 1.35
CDKN3-204ENST00000442975 TUFT1Q9NNX1 390 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 XPNPEP1Q9NQW7 623 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 HCSTQ9UBK5 93 aa23.46■■□□□ 1.35
CDKN3-204ENST00000442975 HOXA2O43364 376 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 DGAT1O75907 488 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 SPATA31C1P0DKV0 1188 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 TOB1P50616 345 aaPredicted RBP23.45■■□□□ 1.34
CDKN3-204ENST00000442975 FAM189BP81408 668 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 HAUS3Q68CZ6 603 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 FERMT3Q86UX7 667 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 HLA-CQ95604 372 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 IFT122Q9HBG6 1241 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 ALG13Q9NP73 1137 aaKnown RBP23.45■■□□□ 1.34
CDKN3-204ENST00000442975 CUL9Q8IWT3 2517 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 WDR81Q562E7 1941 aa23.45■■□□□ 1.34
CDKN3-204ENST00000442975 REV3LO60673 3130 aa23.44■■□□□ 1.34
CDKN3-204ENST00000442975 PHKA2P46019 1235 aa23.44■■□□□ 1.34
CDKN3-204ENST00000442975 PTGDRQ13258 359 aa23.44■■□□□ 1.34
CDKN3-204ENST00000442975 TMEM117Q9H0C3 514 aa23.44■■□□□ 1.34
CDKN3-204ENST00000442975 CHST12Q9NRB3 414 aa23.44■■□□□ 1.34
CDKN3-204ENST00000442975 COG5Q9UP83 839 aa23.44■■□□□ 1.34
CDKN3-204ENST00000442975 A0A0U1RQF3 1178 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 CCT6AP40227 531 aaKnown RBP23.43■■□□□ 1.34
CDKN3-204ENST00000442975 FXR2P51116 673 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDKN3-204ENST00000442975 LONRF3Q496Y0 759 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 TCEAL5Q5H9L2 206 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 MAEAQ7L5Y9 396 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 LRRC43Q8N309 656 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 C4orf32Q8N8J7 132 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 KLHL23Q8NBE8 558 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 ASAP3Q8TDY4 903 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 SYMPKQ92797 1274 aaKnown RBP23.43■■□□□ 1.34
CDKN3-204ENST00000442975 POLR3CQ9BUI4 534 aaPredicted RBP23.43■■□□□ 1.34
CDKN3-204ENST00000442975 POLR3FQ9H1D9 316 aaPredicted RBP23.43■■□□□ 1.34
CDKN3-204ENST00000442975 NSUN3Q9H649 340 aaKnown RBP23.43■■□□□ 1.34
CDKN3-204ENST00000442975 MINDY3Q9H8M7 445 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 AAASQ9NRG9 546 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 AGPAT5Q9NUQ2 364 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 RNF19AQ9NV58 838 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 LRWD1Q9UFC0 647 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 LOXHD1Q8IVV2 1947 aa23.43■■□□□ 1.34
CDKN3-204ENST00000442975 TFDP1Q14186 410 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 MXD4Q14582 209 aaPredicted RBP23.42■■□□□ 1.34
CDKN3-204ENST00000442975 AAK1Q2M2I8 961 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 CLLU1OSQ5K130 101 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 SRGAP1Q7Z6B7 1085 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 HELQQ8TDG4 1101 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 NACC1Q96RE7 527 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 RAB34Q9BZG1 259 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 LMAN2LQ9H0V9 348 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 TYW1Q9NV66 732 aaKnown RBP23.42■■□□□ 1.34
CDKN3-204ENST00000442975 PLAGL2Q9UPG8 496 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 PCDHB12Q9Y5F1 795 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 GTF3C3Q9Y5Q9 886 aa23.42■■□□□ 1.34
CDKN3-204ENST00000442975 ARHGEF35A5YM69 484 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 ASAP2O43150 1006 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 ERLIN2O94905 339 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 ITGB1P05556 798 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 ATF7P17544 494 aaPredicted RBP23.41■■□□□ 1.34
CDKN3-204ENST00000442975 RPA1P27694 616 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 KCNQ1P51787 676 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 CAPSQ13938 189 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 RILPL1Q5EBL4 403 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 LARP1BQ659C4 914 aaKnown RBP23.41■■□□□ 1.34
CDKN3-204ENST00000442975 THNSL1Q8IYQ7 743 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 SNX29Q8TEQ0 813 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 P2RX5Q93086 422 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 CASD1Q96PB1 797 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 UBE2ZQ9H832 354 aaPredicted RBP23.41■■□□□ 1.34
CDKN3-204ENST00000442975 GPRC5CQ9NQ84 441 aa23.41■■□□□ 1.34
CDKN3-204ENST00000442975 INO80B-WBP1J3KQ70 363 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 XRCC6P12956 609 aaKnown RBP eCLIP23.4■■□□□ 1.34
CDKN3-204ENST00000442975 LAG3P18627 525 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 NAALADL2Q58DX5 795 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 EP400NLQ6ZTU2 488 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 ZNF598Q86UK7 904 aaKnown RBP23.4■■□□□ 1.34
CDKN3-204ENST00000442975 COLGALT1Q8NBJ5 622 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 LPPQ93052 612 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.4■■□□□ 1.34
CDKN3-204ENST00000442975 FAM105AQ9NUU6 356 aa23.4■■□□□ 1.34
CDKN3-204ENST00000442975 DBR1Q9UK59 544 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms