RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RAD51AP2Q09MP3 1159 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 ADALQ6DHV7 355 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 ZNF410Q86VK4 478 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 LINC01599Q8WXQ3 324 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 SEPT8Q92599 483 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 LARP4BQ92615 738 aaKnown RBP17.78■□□□□ 0.44
USP39-205ENST00000442708 RNPC3Q96LT9 517 aaKnown RBP17.78■□□□□ 0.44
USP39-205ENST00000442708 SCLT1Q96NL6 688 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 STK17AQ9UEE5 414 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 GBF1Q92538 1859 aa17.78■□□□□ 0.44
USP39-205ENST00000442708 ASAP2O43150 1006 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 MGEA5O60502 916 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
USP39-205ENST00000442708 MXD4Q14582 209 aaPredicted RBP17.77■□□□□ 0.44
USP39-205ENST00000442708 TPRNQ4KMQ1 711 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.44
USP39-205ENST00000442708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP39-205ENST00000442708 RTN4RL1Q86UN2 441 aaPredicted RBP17.77■□□□□ 0.44
USP39-205ENST00000442708 GPBP1Q86WP2 473 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 ZNF710Q8N1W2 664 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 USP38Q8NB14 1042 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 RNF149Q8NC42 400 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
USP39-205ENST00000442708 ST3GAL5Q9UNP4 418 aa17.77■□□□□ 0.44
USP39-205ENST00000442708 A0A1B0GVL5 298 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.76■□□□□ 0.43
USP39-205ENST00000442708 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 ACTN1P12814 892 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 CMA1P23946 247 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 STAT6P42226 847 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 WDR5P61964 334 aaKnown RBP17.76■□□□□ 0.43
USP39-205ENST00000442708 DEFB103AP81534 67 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 CDC42EP1Q00587 391 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 PAK2Q13177 524 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 IKBKEQ14164 716 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 CCDC73Q6ZRK6 1079 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 TMCO2Q7Z6W1 182 aaPredicted RBP17.76■□□□□ 0.43
USP39-205ENST00000442708 DHX58Q96C10 678 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 GOLPH3LQ9H4A5 285 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 HPSEQ9Y251 543 aa17.76■□□□□ 0.43
USP39-205ENST00000442708 ADGRA3Q8IWK6 1321 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 ABHD14A-ACY1A0A1B0GW23 586 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 MYMKA6NI61 221 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
USP39-205ENST00000442708 BAIAP3O94812 1187 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 PFKFB1P16118 471 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 PTENP60484 403 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 NFX1Q12986 1120 aaKnown RBP17.75■□□□□ 0.43
USP39-205ENST00000442708 GIT2Q14161 759 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 IFNLR1Q8IU57 520 aaPredicted RBP17.75■□□□□ 0.43
USP39-205ENST00000442708 STAMQ92783 540 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 KIFAP3Q92845 792 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 APBB2Q92870 758 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 REEP2Q9BRK0 252 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 KIFC3Q9BVG8 833 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
USP39-205ENST00000442708 A0A1W2PPC1 479 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 A0A1W2PQ27 194 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 A0A1W2PQ64 194 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 A0A1W2PQD8 194 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 LRRIQ4A6NIV6 560 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 GRXCR1A8MXD5 290 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 ENPP3O14638 875 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 GPR182O15218 404 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 POU5F1BQ06416 359 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 TFDP1Q14186 410 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 DSC3Q14574 896 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 SRGAP1Q7Z6B7 1085 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 FAM13BQ9NYF5 915 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 KCND2Q9NZV8 630 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 SZT2Q5T011 3432 aa17.74■□□□□ 0.43
USP39-205ENST00000442708 FAM237AA0A1B0GTK4 181 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 NAMPTP43490 491 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 PHKA2P46019 1235 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 NDUFA8P51970 172 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 MBTD1Q05BQ5 628 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 AMHR2Q16671 573 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 CDCA2Q69YH5 1023 aaPredicted RBP17.73■□□□□ 0.43
USP39-205ENST00000442708 SV2BQ7L1I2 683 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 DNAJC19Q96DA6 116 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 TIPINQ9BVW5 301 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 NFKBIZQ9BYH8 718 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
USP39-205ENST00000442708 TTC3P53804 2025 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 TTLL13PA6NNM8 815 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 SOX1O00570 391 aaPredicted RBP17.72■□□□□ 0.43
USP39-205ENST00000442708 EDN1P05305 212 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 NPTX2P47972 431 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 PEX3P56589 373 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 DYMQ7RTS9 669 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 IQUBQ8NA54 791 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 DDX12PQ92771 950 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 ADAM2Q99965 735 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 CCDC113Q9H0I3 377 aa17.72■□□□□ 0.43
USP39-205ENST00000442708 TSPYL2Q9H2G4 693 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms