RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 VPS52Q8N1B4 723 aa23.07■■□□□ 1.28
TMEM50B-204ENST00000442441 TMEM87AQ8NBN3 555 aa23.07■■□□□ 1.28
TMEM50B-204ENST00000442441 NLRP7Q8WX94 980 aa23.07■■□□□ 1.28
TMEM50B-204ENST00000442441 LENG9Q96B70 501 aa23.07■■□□□ 1.28
TMEM50B-204ENST00000442441 ZBP1Q9H171 429 aa23.07■■□□□ 1.28
TMEM50B-204ENST00000442441 NAP1L2Q9ULW6 460 aaPredicted RBP23.07■■□□□ 1.28
TMEM50B-204ENST00000442441 FAM186AA6NE01 2351 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 NBL1P41271 181 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 TBC1D8BQ0IIM8 1120 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 ADCK5Q3MIX3 580 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 TSGA10IPQ3SY00 556 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 ASTLQ6HA08 431 aaPredicted RBP23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 ASCL5Q7RTU5 278 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 PLCD3Q8N3E9 789 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 RSPH1Q8WYR4 309 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 CHST12Q9NRB3 414 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 LIMD1Q9UGP4 676 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 DBR1Q9UK59 544 aaKnown RBP23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 USTQ9Y2C2 406 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 IRAK3Q9Y616 596 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 DMDP11532 3685 aa23.06■■□□□ 1.28
TMEM50B-204ENST00000442441 VPS13AQ96RL7 3174 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 CCDC196A0A1B0GTZ2 297 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 CSDE1O75534 798 aaKnown RBP23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 GNA11P29992 359 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 GIT2Q14161 759 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 UGCGQ16739 394 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 KANK3Q6NY19 840 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 TMEM173Q86WV6 379 aaPredicted RBP23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 RASEFQ8IZ41 740 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 AUTS2Q8WXX7 1259 aa23.05■■□□□ 1.28
TMEM50B-204ENST00000442441 CARNS1A5YM72 827 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 MSH4O15457 936 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 ZC3H11AO75152 810 aaKnown RBP eCLIP23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 CTSAP10619 480 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 EPCAMP16422 314 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 PHKA2P46019 1235 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 POLGP54098 1239 aaPredicted RBP23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 DDX53Q86TM3 631 aaKnown RBP23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 SLC22A17Q8WUG5 538 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 RIT2Q99578 217 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 TRAIPQ9BWF2 469 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 GCOM2Q9BZD3 368 aaPredicted RBP23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 MFSD1Q9H3U5 465 aa23.04■■□□□ 1.28
TMEM50B-204ENST00000442441 PRR23AA6NEV1 266 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 SFNP31947 248 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 CDC42EP1Q00587 391 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 FOXK2Q01167 660 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 DRP2Q13474 957 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 KRT32Q14532 448 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 TARBP2Q15633 366 aaKnown RBP23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 BICD2Q8TD16 824 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 IGSF21Q96ID5 467 aa23.03■■□□□ 1.28
TMEM50B-204ENST00000442441 PRPF3O43395 683 aaKnown RBP23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 CHMP2AO43633 222 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 GAS7O60861 476 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 HMGB1P09429 215 aaKnown RBP23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 CLCN5P51795 746 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 JAK3P52333 1124 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 FGD1P98174 961 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 LPPQ93052 612 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 CYP26B1Q9NR63 512 aa23.02■■□□□ 1.28
TMEM50B-204ENST00000442441 SKIP12755 728 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 SFPQP23246 707 aaKnown RBP eCLIP23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 TWF2Q6IBS0 349 aaKnown RBP23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 GLB1LQ6UWU2 654 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 TMC5Q6UXY8 1006 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 CABP7Q86V35 215 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 BCL7CQ8WUZ0 217 aaPredicted RBP23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 SLC5A5Q92911 643 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 CCDC136Q96JN2 1154 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 TEKT3Q9BXF9 490 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 UNC45AQ9H3U1 944 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 NRDE2Q9H7Z3 1164 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 TBC1D13Q9NVG8 400 aa23.01■■□□□ 1.27
TMEM50B-204ENST00000442441 WDR87Q6ZQQ6 2873 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 A0A087WZ62 844 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 EDIL3O43854 480 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 GALTP07902 379 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 USP11P51784 963 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 LONRF3Q496Y0 759 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 MTERF2Q49AM1 385 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 NOMO2Q5JPE7 1267 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 LRCH2Q5VUJ6 765 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 PPFIBP1Q86W92 1011 aa23■■□□□ 1.27
TMEM50B-204ENST00000442441 ACSF2Q96CM8 615 aaPredicted RBP23■■□□□ 1.27
TMEM50B-204ENST00000442441 FDXACB1Q9BRP7 624 aaPredicted RBP23■■□□□ 1.27
TMEM50B-204ENST00000442441 NIFKQ9BYG3 293 aaKnown RBP23■■□□□ 1.27
TMEM50B-204ENST00000442441 SEPT9Q9UHD8 586 aaPredicted RBP23■■□□□ 1.27
TMEM50B-204ENST00000442441 PIN4Q9Y237 131 aaKnown RBP23■■□□□ 1.27
TMEM50B-204ENST00000442441 IGKV6-21A0A0C4DH24 114 aa22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 DNM2P50570 870 aa22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 RNASELQ05823 741 aaKnown RBP22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 XKR3Q5GH77 459 aa22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 FRMD5Q7Z6J6 570 aa22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 GPR149Q86SP6 731 aa22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 CCDC148Q8NFR7 591 aa22.99■■□□□ 1.27
TMEM50B-204ENST00000442441 RDM1Q8NG50 284 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms