RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 MRPS9P82933 396 aaKnown RBP6.59□□□□□ -1.35
PFDN4-202ENST00000441080 KIAA2012Q0VF49 1180 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 PCOLCEQ15113 449 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 PTPN21Q16825 1174 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 CCDC178Q5BJE1 867 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 ODR4Q5SWX8 454 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 TRIM68Q6AZZ1 485 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 KLHDC10Q6PID8 442 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 LARP4Q71RC2 724 aaKnown RBP eCLIP6.59□□□□□ -1.35
PFDN4-202ENST00000441080 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 AUTS2Q8WXX7 1259 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 FUBP3Q96I24 572 aaKnown RBP eCLIP6.59□□□□□ -1.35
PFDN4-202ENST00000441080 KRTAP4-12Q9BQ66 201 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 KIAA1683Q9H0B3 1180 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 USP40Q9NVE5 1235 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 DPP7Q9UHL4 492 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 FAM184BQ9ULE4 1060 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 VWA7Q9Y334 891 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 SPEF1Q9Y4P9 236 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 CDY2AQ9Y6F7 541 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 ALDH1L1O75891 902 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 RBP3P10745 1247 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 BMP7P18075 431 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 MRE11P49959 708 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 NEK2P51955 445 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 SESN2P58004 480 aaPredicted RBP6.58□□□□□ -1.36
PFDN4-202ENST00000441080 ZNF827Q17R98 1081 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 ZNF568Q3ZCX4 644 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 ZMAT1Q5H9K5 638 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 BORAQ6PGQ7 559 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 LCNL1Q6ZST4 164 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 ZBTB46Q86UZ6 589 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 SLC41A1Q8IVJ1 513 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 KBTBD2Q8IY47 623 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 NKD2Q969F2 451 aaPredicted RBP6.58□□□□□ -1.36
PFDN4-202ENST00000441080 FAXDC2Q96IV6 333 aa6.58□□□□□ -1.36
PFDN4-202ENST00000441080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.58□□□□□ -1.36
PFDN4-202ENST00000441080 EVLQ9UI08 416 aaPredicted RBP6.58□□□□□ -1.36
PFDN4-202ENST00000441080 A0A0A6YYK5 440 aaPredicted RBP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 SEC24DO94855 1032 aaPredicted RBP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 SASH1O94885 1247 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 OSMP13725 252 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 NRG3P56975 720 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 CDK17Q00537 523 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 ADAM15Q13444 863 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 PCBP2Q15366 365 aaKnown RBP eCLIP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 MAN2A1Q16706 1144 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 MUM1Q2TAK8 710 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 AGBL4Q5VU57 503 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 KCNK18Q7Z418 384 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 PNMA8AQ86V59 439 aaPredicted RBP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 SIAH1Q8IUQ4 282 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 GLB1L2Q8IW92 636 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 MARCH10Q8NA82 808 aaPredicted RBP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 GFM2Q969S9 779 aaKnown RBP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 CHMP4CQ96CF2 233 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 FDXACB1Q9BRP7 624 aaPredicted RBP6.57□□□□□ -1.36
PFDN4-202ENST00000441080 SOX7Q9BT81 388 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 GPR45Q9Y5Y3 372 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 MRFAP1Q9Y605 127 aa6.57□□□□□ -1.36
PFDN4-202ENST00000441080 FZD9O00144 591 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 XPOTO43592 962 aaKnown RBP6.56□□□□□ -1.36
PFDN4-202ENST00000441080 FSBPO95073 299 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 HNRNPLP14866 589 aaKnown RBP eCLIP6.56□□□□□ -1.36
PFDN4-202ENST00000441080 CCND1P24385 295 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 MTNR1BP49286 362 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 SLC5A3P53794 718 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 KRT85P78386 507 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 MGAT5Q09328 741 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 ACAP2Q15057 778 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 TTF1Q15361 905 aaPredicted RBP6.56□□□□□ -1.36
PFDN4-202ENST00000441080 LMBR1LQ6UX01 489 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 TSPEARQ8WU66 669 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 OSBPL6Q9BZF3 934 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 SLC13A1Q9BZW2 595 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 OR10A2Q9H208 303 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
PFDN4-202ENST00000441080 DAPK3O43293 454 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 B4GALT3O60512 393 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 HSP90B1P14625 803 aaKnown RBP6.55□□□□□ -1.36
PFDN4-202ENST00000441080 AGXTP21549 392 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 CCT2P78371 535 aaKnown RBP6.55□□□□□ -1.36
PFDN4-202ENST00000441080 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 MBNL2Q5VZF2 373 aaKnown RBP6.55□□□□□ -1.36
PFDN4-202ENST00000441080 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 PLEKHH3Q7Z736 793 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 LGI4Q8N135 537 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 PPP1R14CQ8TAE6 165 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 FEZF2Q8TBJ5 459 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 SSH1Q8WYL5 1049 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 ACE2Q9BYF1 805 aaPredicted RBP6.55□□□□□ -1.36
PFDN4-202ENST00000441080 ZNF277Q9NRM2 450 aaPredicted RBP6.55□□□□□ -1.36
PFDN4-202ENST00000441080 AASDHPPTQ9NRN7 309 aa6.55□□□□□ -1.36
PFDN4-202ENST00000441080 KLHL33A6NCF5 533 aa6.54□□□□□ -1.36
PFDN4-202ENST00000441080 PCDHGA12O60330 932 aa6.54□□□□□ -1.36
PFDN4-202ENST00000441080 B4GALT4O60513 344 aa6.54□□□□□ -1.36
PFDN4-202ENST00000441080 SNUPNO95149 360 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms