RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 SNRNP48Q6IEG0 339 aaKnown RBP6.87□□□□□ -1.31
CNOT1-202ENST00000441024 STYK1Q6J9G0 422 aa6.87□□□□□ -1.31
CNOT1-202ENST00000441024 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
CNOT1-202ENST00000441024 RNF169Q8NCN4 708 aa6.87□□□□□ -1.31
CNOT1-202ENST00000441024 HEXIM2Q96MH2 286 aaKnown RBP6.87□□□□□ -1.31
CNOT1-202ENST00000441024 TTC25Q96NG3 672 aa6.87□□□□□ -1.31
CNOT1-202ENST00000441024 EPB41L4AQ9HCS5 686 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-202ENST00000441024 ADAM22Q9P0K1 906 aa6.87□□□□□ -1.31
CNOT1-202ENST00000441024 BAIAP2L1Q9UHR4 511 aa6.87□□□□□ -1.31
CNOT1-202ENST00000441024 GPR75-ASB3A0A0A6YYF3 556 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SSU72P8A0A1W2PR75 194 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TTC26A0AVF1 554 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 LRRD1A4D1F6 860 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 GOLGA8IPA6NC78 632 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 GOLGA8JA6NMD2 632 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 POC1B-GALNT4F8VUJ3 575 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CLDN3O15551 220 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TTI1O43156 1089 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 FGGP02679 453 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SRGNP10124 158 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 EDRF1Q3B7T1 1238 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 ARL13BQ3SXY8 428 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 MUM1L1Q5H9M0 696 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 XRRA1Q6P2D8 792 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 BANK1Q8NDB2 785 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 ASNSD1Q9NWL6 643 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 NXF1Q9UBU9 619 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CNOT8Q9UFF9 292 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TTLL3Q9Y4R7 772 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 A0A087WUV0 522 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 IQANK1A0A1B0GTG1 560 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 A0A1W2PQJ5 194 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 STXBP3O00186 592 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 MT-ND3P03897 115 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 NR1D1P20393 614 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CHRNA3P32297 505 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CXCR5P32302 372 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 MMP14P50281 582 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CLNS1AP54105 237 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CACNB3P54284 484 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 PDE1BQ01064 536 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 RPS6KA2Q15349 733 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CEP55Q53EZ4 464 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SIX6OS1Q8N1H7 587 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 MARCH10Q8NA82 808 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 LINC00116Q8NCU8 138 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 NUF2Q9BZD4 464 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TOPORSQ9NS56 1045 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 DDX56Q9NY93 547 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 MRFAP1Q9Y605 127 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CASQ2O14958 399 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 FDPSP14324 419 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 RASA1P20936 1047 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SOX5P35711 763 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CCT5P48643 541 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 FXR2P51116 673 aaKnown RBP eCLIP6.86□□□□□ -1.314e-8■■■□□ 19
CNOT1-202ENST00000441024 GPC3P51654 580 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 EFNA5P52803 228 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SNX1Q13596 522 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 KCTD16Q68DU8 428 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CC2D1AQ6P1N0 951 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 RAB44Q7Z6P3 723 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 LDHDQ86WU2 507 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SRRM1Q8IYB3 904 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 PDIK1LQ8N165 341 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 GPD1LQ8N335 351 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 PSPC1Q8WXF1 523 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 OSBPL9Q96SU4 736 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.86□□□□□ -1.315e-7■■□□□ 12.7
CNOT1-202ENST00000441024 LXNQ9BS40 222 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 Q9H521 79 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 DDX60Q8IY21 1712 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 CNTNAP5Q8WYK1 1306 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 POTEFA5A3E0 1075 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SFI1A8K8P3 1242 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 C19orf81C9J6K1 198 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TEX33O43247 280 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 POTEIP0CG38 1075 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 PSMA2P25787 234 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 NR1I3Q14994 352 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 POTEGQ6S5H5 508 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 POTEEQ6S8J3 1075 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 FBXL16Q8N461 479 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 UHMK1Q8TAS1 419 aaKnown RBP6.86□□□□□ -1.31
CNOT1-202ENST00000441024 APOL6Q9BWW8 343 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TXLNGQ9NUQ3 528 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 IP6K2Q9UHH9 426 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 ZNRF3Q9ULT6 936 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 PCDHA10Q9Y5I2 948 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 ZHX2Q9Y6X8 837 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 TJP1Q07157 1748 aa6.86□□□□□ -1.31
CNOT1-202ENST00000441024 SALL3Q9BXA9 1300 aa6.85□□□□□ -1.31
CNOT1-202ENST00000441024 PITPNM2Q9BZ72 1349 aa6.85□□□□□ -1.31
CNOT1-202ENST00000441024 DENND3A2RUS2 1198 aa6.85□□□□□ -1.31
CNOT1-202ENST00000441024 ZRANB2O95218 330 aaKnown RBP eCLIP6.85□□□□□ -1.31
CNOT1-202ENST00000441024 SRGAP2CP0DJJ0 459 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms