RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CYP11B2P19099 503 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 GLRA2P23416 452 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 ARL2P36404 184 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 UBA7P41226 1012 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 KARSQ15046 597 aaKnown RBP20.03■□□□□ 0.8
CPSF4-205ENST00000440514 STK38Q15208 465 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 FAM102BQ5T8I3 360 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 PPP2R2DQ66LE6 453 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 USP49Q70CQ1 688 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 TOP1MTQ969P6 601 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 NT5C3AQ9H0P0 336 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 MINDY3Q9H8M7 445 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 ZDHHC9Q9Y397 364 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 SRPRBQ9Y5M8 271 aaKnown RBP20.03■□□□□ 0.8
CPSF4-205ENST00000440514 TMEM265A0A087WTH1 108 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 ASAP2O43150 1006 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 SFPQP23246 707 aaKnown RBP eCLIP20.02■□□□□ 0.8
CPSF4-205ENST00000440514 DSC3Q14574 896 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 MXD4Q14582 209 aaPredicted RBP20.02■□□□□ 0.8
CPSF4-205ENST00000440514 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 RASSF8Q8NHQ8 419 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 LRRC15Q8TF66 581 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 BSNDQ8WZ55 320 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 RUSC1Q9BVN2 902 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 ZNF576Q9H609 170 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 SLC28A3Q9HAS3 691 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 POLD4Q9HCU8 107 aa20.02■□□□□ 0.8
CPSF4-205ENST00000440514 MORC2Q9Y6X9 1032 aaPredicted RBP20.02■□□□□ 0.8
CPSF4-205ENST00000440514 TTC3P53804 2025 aa20.02■□□□□ 0.79
CPSF4-205ENST00000440514 SSBP05455 408 aaKnown RBP eCLIP20.01■□□□□ 0.79
CPSF4-205ENST00000440514 PLCG1P19174 1290 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 PHKA2P46019 1235 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 HTRA4P83105 476 aaPredicted RBP20.01■□□□□ 0.79
CPSF4-205ENST00000440514 TFDP1Q14186 410 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 CATSPER4Q7RTX7 472 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 SPRED2Q7Z698 418 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 KRI1Q8N9T8 703 aaKnown RBP20.01■□□□□ 0.79
CPSF4-205ENST00000440514 SYMPKQ92797 1274 aaKnown RBP20.01■□□□□ 0.79
CPSF4-205ENST00000440514 CALML4Q96GE6 196 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 EPSTI1Q96J88 318 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 YME1L1Q96TA2 773 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 RAD9AQ99638 391 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 SEMA6BQ9H3T3 888 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 RGS18Q9NS28 235 aa20.01■□□□□ 0.79
CPSF4-205ENST00000440514 SPTLC2O15270 562 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 SLC26A4O43511 780 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 YEATS4O95619 227 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 DNM1Q05193 864 aaKnown RBP20■□□□□ 0.79
CPSF4-205ENST00000440514 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 NPAS4Q8IUM7 802 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 CHAMP1Q96JM3 812 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 GUCD1Q96NT3 240 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 INO80BQ9C086 356 aaPredicted RBP20■□□□□ 0.79
CPSF4-205ENST00000440514 C1orf112Q9NSG2 853 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 MTMR10Q9NXD2 777 aa20■□□□□ 0.79
CPSF4-205ENST00000440514 PIN4Q9Y237 131 aaKnown RBP20■□□□□ 0.79
CPSF4-205ENST00000440514 COL4A4P53420 1690 aaPredicted RBP20■□□□□ 0.79
CPSF4-205ENST00000440514 LRRIQ4A6NIV6 560 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 C9IYK1 514 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 PLA2G4BP0C869 781 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 SARSP49591 514 aaKnown RBP19.99■□□□□ 0.79
CPSF4-205ENST00000440514 PTENP60484 403 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 TAP1Q03518 808 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 RINT1Q6NUQ1 792 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 CRIPAKQ8N1N5 446 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 CCSER1Q9C0I3 900 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 RC3H2Q9HBD1 1191 aaKnown RBP19.99■□□□□ 0.79
CPSF4-205ENST00000440514 BLOC1S4Q9NUP1 217 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 INSL6Q9Y581 213 aa19.99■□□□□ 0.79
CPSF4-205ENST00000440514 LINC01553A4QN01 128 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 INO80B-WBP1J3KQ70 363 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 HIP1RO75146 1068 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
CPSF4-205ENST00000440514 GATMP50440 423 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 SLC12A3P55017 1021 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 MBTD1Q05BQ5 628 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 RAD51AP2Q09MP3 1159 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 GRIN2CQ14957 1233 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 C1orf186Q6ZWK4 172 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 SLC24A5Q71RS6 500 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 IFNLR1Q8IU57 520 aaPredicted RBP19.98■□□□□ 0.79
CPSF4-205ENST00000440514 DAW1Q8N136 415 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 KCTD17Q8N5Z5 321 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 SYT2Q8N9I0 419 aaPredicted RBP19.98■□□□□ 0.79
CPSF4-205ENST00000440514 SP7Q8TDD2 431 aaPredicted RBP19.98■□□□□ 0.79
CPSF4-205ENST00000440514 CERS4Q9HA82 394 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 AGPAT5Q9NUQ2 364 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 ADGRA3Q8IWK6 1321 aa19.98■□□□□ 0.79
CPSF4-205ENST00000440514 PPP6R2O75170 966 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 STAG3L1P0CL83 205 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 POU5F1BQ06416 359 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 MAPK7Q13164 816 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 DHX8Q14562 1220 aaKnown RBP19.97■□□□□ 0.79
CPSF4-205ENST00000440514 MCM6Q14566 821 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 RAD54LQ92698 747 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 KIFAP3Q92845 792 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 KIFC3Q9BVG8 833 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 LRFN2Q9ULH4 789 aa19.97■□□□□ 0.79
CPSF4-205ENST00000440514 NPHP3-ACAD11A0A0J9YXS1 232 aa19.96■□□□□ 0.79
CPSF4-205ENST00000440514 TSPAN1O60635 241 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms