RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 LXNQ9BS40 222 aa18.84■□□□□ 0.61
COL16A1-204ENST00000440437 BRMS1Q9HCU9 246 aa18.84■□□□□ 0.61
COL16A1-204ENST00000440437 TLR9Q9NR96 1032 aa18.84■□□□□ 0.61
COL16A1-204ENST00000440437 SUCLA2Q9P2R7 463 aaPredicted RBP18.84■□□□□ 0.61
COL16A1-204ENST00000440437 FAM50BQ9Y247 325 aa18.84■□□□□ 0.61
COL16A1-204ENST00000440437 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
COL16A1-204ENST00000440437 MBTPS2O43462 519 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 SFPQP23246 707 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL16A1-204ENST00000440437 ZP2Q05996 745 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 NCAPH2Q6IBW4 605 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 SLFN12Q8IYM2 578 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 THNSL1Q8IYQ7 743 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 EFHBQ8N7U6 833 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 MSLNLQ96KJ4 702 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 TRAIPQ9BWF2 469 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 DHX33Q9H6R0 707 aaKnown RBP18.83■□□□□ 0.6
COL16A1-204ENST00000440437 CHST12Q9NRB3 414 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 DACT1Q9NYF0 836 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 PRKAG3Q9UGI9 489 aa18.83■□□□□ 0.6
COL16A1-204ENST00000440437 BTBD18B2RXH4 712 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 PI4K2BG5E9Z4 385 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 WNT7AO00755 349 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 FSCN2O14926 492 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 GLP2RO95838 553 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 EOMESO95936 686 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 NRIP1P48552 1158 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 ERVFC1P60507 584 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 PLCB3Q01970 1234 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 SMAD4Q13485 552 aaKnown RBP18.82■□□□□ 0.6
COL16A1-204ENST00000440437 SMAD2Q15796 467 aaKnown RBP18.82■□□□□ 0.6
COL16A1-204ENST00000440437 CLUL1Q15846 466 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 KSR1Q8IVT5 923 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 DIS3L2Q8IYB7 885 aaKnown RBP18.82■□□□□ 0.6
COL16A1-204ENST00000440437 ABI1Q8IZP0 508 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 SLC7A3Q8WY07 619 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 DYDC2Q96IM9 177 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 CEP170P1Q96L14 293 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 NLRP4Q96MN2 994 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 INO80BQ9C086 356 aaPredicted RBP18.82■□□□□ 0.6
COL16A1-204ENST00000440437 IFT122Q9HBG6 1241 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 C11orf16Q9NQ32 467 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 RGL1Q9NZL6 768 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 CLEC1BQ9P126 229 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 LZTS1Q9Y250 596 aa18.82■□□□□ 0.6
COL16A1-204ENST00000440437 C19orf67A6NJJ6 358 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 MARCH6O60337 910 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 BAG4O95429 457 aaKnown RBP18.81■□□□□ 0.6
COL16A1-204ENST00000440437 YWHABP31946 246 aaKnown RBP18.81■□□□□ 0.6
COL16A1-204ENST00000440437 SSTR3P32745 418 aaPredicted RBP18.81■□□□□ 0.6
COL16A1-204ENST00000440437 RFC5P40937 340 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 PHKA2P46019 1235 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 NDUFV1P49821 464 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 KCNT2Q6UVM3 1135 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 RBM23Q86U06 439 aaKnown RBP18.81■□□□□ 0.6
COL16A1-204ENST00000440437 ADHFE1Q8IWW8 467 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 RNF169Q8NCN4 708 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 HELQQ8TDG4 1101 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 MRPS27Q92552 414 aaKnown RBP18.81■□□□□ 0.6
COL16A1-204ENST00000440437 CD207Q9UJ71 328 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 COL4A3BPQ9Y5P4 624 aa18.81■□□□□ 0.6
COL16A1-204ENST00000440437 EYA4O95677 639 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 PBX3P40426 434 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 FOSBP53539 338 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 POLGP54098 1239 aaPredicted RBP18.8■□□□□ 0.6
COL16A1-204ENST00000440437 CYP4A11Q02928 519 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 CTTNQ14247 550 aaKnown RBP18.8■□□□□ 0.6
COL16A1-204ENST00000440437 PDE12Q6L8Q7 609 aaKnown RBP18.8■□□□□ 0.6
COL16A1-204ENST00000440437 EXOC8Q8IYI6 725 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 ZNF558Q96NG5 402 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 ZSWIM4Q9H7M6 989 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 RAPGEFL1Q9UHV5 662 aa18.8■□□□□ 0.6
COL16A1-204ENST00000440437 PIN4Q9Y237 131 aaKnown RBP18.8■□□□□ 0.6
COL16A1-204ENST00000440437 ZBTB39O15060 712 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 GAS2O43903 313 aaKnown RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 PPM1AP35813 382 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 COASYQ13057 564 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 EMC2Q15006 297 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 CALCRLQ16602 461 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 DUSP6Q16828 381 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 TWF2Q6IBS0 349 aaKnown RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 OTUD6AQ7L8S5 288 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 CATSPER4Q7RTX7 472 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 SMRP1Q8NCR6 262 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 MICAL1Q8TDZ2 1067 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 PSPC1Q8WXF1 523 aaKnown RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 TMEM143Q96AN5 459 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 EIF2AK1Q9BQI3 630 aaKnown RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 LRFN3Q9BTN0 628 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 MRPL9Q9BYD2 267 aaKnown RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 BMP2KQ9NSY1 1161 aaPredicted RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 AGPAT5Q9NUQ2 364 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 FAM105AQ9NUU6 356 aa18.79■□□□□ 0.6
COL16A1-204ENST00000440437 BARX2Q9UMQ3 279 aaPredicted RBP18.79■□□□□ 0.6
COL16A1-204ENST00000440437 PER2O15055 1255 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 NEMFO60524 1076 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 GPR37L1O60883 481 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 SLITRK3O94933 977 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 LYPLA2O95372 231 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 KCNC3Q14003 757 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 TRIM29Q14134 588 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms