RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 UBE2TQ9NPD8 197 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 SUCLA2Q9P2R7 463 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 NENFQ9UMX5 172 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 NOVA2Q9UNW9 492 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 LY75O60449 1722 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 SMIM23A6NLE4 172 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 MYO1FO00160 1098 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 ATMINO43313 823 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 ERLIN2O94905 339 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 MDH1P40925 334 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 PRELPP51888 382 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 UHMK1Q8TAS1 419 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 ALG3Q92685 438 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 APEX2Q9UBZ4 518 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 A0A087WUV0 522 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 ARHGEF35A5YM69 484 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 H0YGN5 161 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 MARCKSL1P49006 195 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 MMP14P50281 582 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 RNF187Q5TA31 235 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 CPNE8Q86YQ8 564 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 CCT8L2Q96SF2 557 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 NFS1Q9Y697 457 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 GOLGA8IPA6NC78 632 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 GOLGA8JA6NMD2 632 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 K7ENM7 598 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 IPO5O00410 1097 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 CYP3A4P08684 503 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 INPP5BP32019 993 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 CUL1Q13616 776 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 SYCE1Q8N0S2 351 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 DAW1Q8N136 415 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 CBWD1Q9BRT8 395 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 EPN3Q9H201 632 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 HOMER2Q9NSB8 354 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 UTP11Q9Y3A2 253 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 KRT13P13646 458 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 PTGISQ16647 500 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 KRT27Q7Z3Y8 459 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 CCDC26Q8TAB7 109 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 ZNF473Q8WTR7 871 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 RFFLQ8WZ73 363 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 KRT35Q92764 455 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 AGBL1Q96MI9 1066 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 NACC1Q96RE7 527 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 VEZTQ9HBM0 779 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 TUFT1Q9NNX1 390 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 SERPINA10Q9UK55 444 aa14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 TRPC5Q9UL62 973 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-204ENST00000439977 EMSYQ7Z589 1322 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 FOCADQ5VW36 1801 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 HMGB1P1B2RPK0 211 aaPredicted RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 ONECUT3O60422 494 aaPredicted RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 RAD17O75943 681 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 LMNB1P20700 586 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 BFSP1Q12934 665 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 KRT71Q3SY84 523 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 GRIPAP1Q4V328 841 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 ARHGEF19Q8IW93 802 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 CD302Q8IX05 232 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 SLC5A5Q92911 643 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 LRRC45Q96CN5 670 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 CALR3Q96L12 384 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 CTTNBP2NLQ9P2B4 639 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 SNX24Q9Y343 169 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 UBR3Q6ZT12 1888 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 PIK3CDO00329 1044 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 CES2O00748 559 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 EIF3DO15371 548 aaKnown RBP eCLIP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 DDX3YO15523 660 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 SLC26A4O43511 780 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 FTLP02792 175 aaPredicted RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 PLTPP55058 493 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 MAGOHP61326 146 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 PPP3CAQ08209 521 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 IFT88Q13099 833 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 PPP2R5CQ13362 524 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 DGKZQ13574 1117 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 UBAP2Q5T6F2 1119 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 NLRP14Q86W24 1093 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 CPXCR1Q8N123 301 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 RASGEF1CQ8N431 466 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 MYCBPAPQ8TBZ2 947 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 MDM1Q8TC05 714 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 MAGOHBQ96A72 148 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 BTBD6Q96KE9 485 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 FAM84AQ96KN4 292 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 WDR11Q9BZH6 1224 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 GPRC5CQ9NQ84 441 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 PCNTO95613 3336 aa14.68□□□□□ -0.06
HERPUD1-204ENST00000439977 TLDC2A0PJX2 215 aa14.67□□□□□ -0.06
HERPUD1-204ENST00000439977 GTPBP10A4D1E9 387 aaKnown RBP14.67□□□□□ -0.06
HERPUD1-204ENST00000439977 YDJCA8MPS7 323 aa14.67□□□□□ -0.06
HERPUD1-204ENST00000439977 CCDC188H7C350 402 aa14.67□□□□□ -0.06
HERPUD1-204ENST00000439977 ITGB5P18084 799 aa14.67□□□□□ -0.06
HERPUD1-204ENST00000439977 IFFO1Q0D2I5 559 aa14.67□□□□□ -0.06
HERPUD1-204ENST00000439977 CC2D2BQ6DHV5 1058 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms