RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 C9IYK1 514 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 BMP15O95972 392 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 IGFBP4P22692 258 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 ARL2P36404 184 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 SARSP49591 514 aaKnown RBP18.35■□□□□ 0.53
TOM1-207ENST00000439512 MXD4Q14582 209 aaPredicted RBP18.35■□□□□ 0.53
TOM1-207ENST00000439512 PADI6Q6TGC4 694 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 RNF149Q8NC42 400 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 MMTAG2Q9BU76 263 aaKnown RBP18.35■□□□□ 0.53
TOM1-207ENST00000439512 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 RALGAPA2Q2PPJ7 1873 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 NLRC5Q86WI3 1866 aa18.35■□□□□ 0.53
TOM1-207ENST00000439512 DGKIO75912 1065 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 LINC00271P0C7V0 271 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 SFPQP23246 707 aaKnown RBP eCLIP18.34■□□□□ 0.53
TOM1-207ENST00000439512 FAM189BP81408 668 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 CATSPER4Q7RTX7 472 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 ASAP3Q8TDY4 903 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 TGS1Q96RS0 853 aaKnown RBP18.34■□□□□ 0.53
TOM1-207ENST00000439512 BHMT2Q9H2M3 363 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
TOM1-207ENST00000439512 GPRC5CQ9NQ84 441 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 DNM3Q9UQ16 869 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 KIAA1671Q9BY89 1806 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 MYO9BQ13459 2157 aa18.34■□□□□ 0.53
TOM1-207ENST00000439512 E9PMD0 336 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 CYP11B2P19099 503 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 ERVK-21P61565 698 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.52
TOM1-207ENST00000439512 TFDP1Q14186 410 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 BTG3Q14201 252 aaPredicted RBP18.33■□□□□ 0.52
TOM1-207ENST00000439512 FAM102BQ5T8I3 360 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.52
TOM1-207ENST00000439512 SRGAP1Q7Z6B7 1085 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 FIBCD1Q8N539 461 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 MCPH1Q8NEM0 835 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.52
TOM1-207ENST00000439512 PLIN2Q99541 437 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 C17orf80Q9BSJ5 609 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 POLR3FQ9H1D9 316 aaPredicted RBP18.33■□□□□ 0.52
TOM1-207ENST00000439512 MINDY3Q9H8M7 445 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 POLD4Q9HCU8 107 aa18.33■□□□□ 0.52
TOM1-207ENST00000439512 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
TOM1-207ENST00000439512 GLRA2P23416 452 aa18.32■□□□□ 0.52
TOM1-207ENST00000439512 PHKA2P46019 1235 aa18.32■□□□□ 0.52
TOM1-207ENST00000439512 GATMP50440 423 aa18.32■□□□□ 0.52
TOM1-207ENST00000439512 ZNF689Q96CS4 500 aaPredicted RBP18.32■□□□□ 0.52
TOM1-207ENST00000439512 CHST12Q9NRB3 414 aa18.32■□□□□ 0.52
TOM1-207ENST00000439512 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
TOM1-207ENST00000439512 REV3LO60673 3130 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 LPXNO60711 386 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 EYA4O95677 639 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
TOM1-207ENST00000439512 UBA7P41226 1012 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 PTENP60484 403 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 GRIN1Q05586 938 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 CAPSQ13938 189 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 PTPAQ15257 358 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 PAN2Q504Q3 1202 aaKnown RBP18.31■□□□□ 0.52
TOM1-207ENST00000439512 KCNK18Q7Z418 384 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 CABP7Q86V35 215 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 RNF169Q8NCN4 708 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 CDK5RAP3Q96JB5 506 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 AK8Q96MA6 479 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 PNMA5Q96PV4 448 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 ELAC1Q9H777 363 aaKnown RBP18.31■□□□□ 0.52
TOM1-207ENST00000439512 TMEM161AQ9NX61 479 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
TOM1-207ENST00000439512 SPTBN5Q9NRC6 3674 aaKnown RBP18.31■□□□□ 0.52
TOM1-207ENST00000439512 ATG2AQ2TAZ0 1938 aa18.31■□□□□ 0.52
TOM1-207ENST00000439512 ADGRA3Q8IWK6 1321 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 A0A0U1RQF3 1178 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 INO80B-WBP1J3KQ70 363 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 POU5F1BQ06416 359 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 GRB10Q13322 594 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 EPC2Q52LR7 807 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 TWF2Q6IBS0 349 aaKnown RBP18.3■□□□□ 0.52
TOM1-207ENST00000439512 ECHDC2Q86YB7 292 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 TMEM192Q8IY95 271 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 FBXO22Q8NEZ5 403 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 MAFAQ8NHW3 353 aaPredicted RBP18.3■□□□□ 0.52
TOM1-207ENST00000439512 PPM1EQ8WY54 764 aa18.3■□□□□ 0.52
TOM1-207ENST00000439512 FNDC1Q4ZHG4 1894 aaPredicted RBP18.3■□□□□ 0.52
TOM1-207ENST00000439512 LRRIQ4A6NIV6 560 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 TBKBP1A7MCY6 615 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 SSBP05455 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
TOM1-207ENST00000439512 FGFR1P11362 822 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 PDIA4P13667 645 aaKnown RBP18.29■□□□□ 0.52
TOM1-207ENST00000439512 POU3F3P20264 500 aaPredicted RBP18.29■□□□□ 0.52
TOM1-207ENST00000439512 LONP1P36776 959 aaKnown RBP18.29■□□□□ 0.52
TOM1-207ENST00000439512 CCDC85BQ15834 202 aaPredicted RBP18.29■□□□□ 0.52
TOM1-207ENST00000439512 HYIQ5T013 277 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 IFNLR1Q8IU57 520 aaPredicted RBP18.29■□□□□ 0.52
TOM1-207ENST00000439512 CMTR2Q8IYT2 770 aaKnown RBP18.29■□□□□ 0.52
TOM1-207ENST00000439512 SAMD11Q96NU1 681 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 USP28Q96RU2 1077 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 NT5C3AQ9H0P0 336 aa18.29■□□□□ 0.52
TOM1-207ENST00000439512 AGPAT5Q9NUQ2 364 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms