RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 BMPR1AP36894 532 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 PHKA2P46019 1235 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 LAMTOR4Q0VGL1 99 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 DSC3Q14574 896 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 NBR1Q14596 966 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 CCDC85BQ15834 202 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 NAALADL2Q58DX5 795 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 ARL6IP4Q66PJ3 421 aaKnown RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 TWF2Q6IBS0 349 aaKnown RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 KSR1Q8IVT5 923 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 KCTD17Q8N5Z5 321 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 SNX29Q8TEQ0 813 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 RSPH1Q8WYR4 309 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 SNX21Q969T3 373 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 PLVAPQ9BX97 442 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 DNM3Q9UQ16 869 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 MTCH2Q9Y6C9 303 aa11.64□□□□□ -0.55
MCF2L-216ENST00000439475 RANBP2P49792 3224 aaKnown RBP11.64□□□□□ -0.55
MCF2L-216ENST00000439475 A0A0U1RQF3 1178 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 H3BNC9 293 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 USO1O60763 962 aaKnown RBP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 ERLIN2O94905 339 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 FGFR4P22455 802 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 AXLP30530 894 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 CTNNB1P35222 781 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 ARL2P36404 184 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 RAB27AP51159 221 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 PAN2Q504Q3 1202 aaKnown RBP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 ECHDC2Q86YB7 292 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 IGSF22Q8N9C0 903 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 CLP1Q92989 425 aaKnown RBP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 PGBD4Q96DM1 585 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 C11orf84Q9BUA3 381 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 LMAN2LQ9H0V9 348 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 IFT122Q9HBG6 1241 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 KIAA1024Q9UPX6 916 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 PIN4Q9Y237 131 aaKnown RBP11.63□□□□□ -0.55
MCF2L-216ENST00000439475 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
MCF2L-216ENST00000439475 A0A087WWV3 80 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 TBKBP1A7MCY6 615 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 C5orf67F2Z3F1 127 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 INO80B-WBP1J3KQ70 363 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
MCF2L-216ENST00000439475 CYP11B2P19099 503 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 PTENP60484 403 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 PPP2R5AQ15172 486 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 FAM102BQ5T8I3 360 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 MAEAQ7L5Y9 396 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 ZBTB8OSQ8IWT0 167 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 RNF169Q8NCN4 708 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 GDPD5Q8WTR4 605 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 P2RX5Q93086 422 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 AK8Q96MA6 479 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 TMEM117Q9H0C3 514 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 RC3H2Q9HBD1 1191 aaKnown RBP11.62□□□□□ -0.55
MCF2L-216ENST00000439475 XPNPEP1Q9NQW7 623 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
MCF2L-216ENST00000439475 DAXXQ9UER7 740 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-216ENST00000439475 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 COL4A6Q14031 1691 aa11.62□□□□□ -0.55
MCF2L-216ENST00000439475 CARNS1A5YM72 827 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 SLC26A4O43511 780 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 LPXNO60711 386 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 ZNF623O75123 536 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 SYT1P21579 422 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 AAK1Q2M2I8 961 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 SPRED2Q7Z698 418 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-216ENST00000439475 HACE1Q8IYU2 909 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 PPP2R3CQ969Q6 453 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 MRPL38Q96DV4 380 aaKnown RBP11.61□□□□□ -0.55
MCF2L-216ENST00000439475 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 MRPL9Q9BYD2 267 aaKnown RBP11.61□□□□□ -0.55
MCF2L-216ENST00000439475 NFKBIZQ9BYH8 718 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 POLR3FQ9H1D9 316 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-216ENST00000439475 C2orf40Q9H1Z8 148 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 BHMT2Q9H2M3 363 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 ZSCAN16Q9H4T2 348 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-216ENST00000439475 AGPAT5Q9NUQ2 364 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 FAM105AQ9NUU6 356 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 THEGQ9P2T0 379 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 COG5Q9UP83 839 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 MRPL42Q9Y6G3 142 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms