RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 PCDHGC5Q9Y5F6 944 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 COL4A3BPQ9Y5P4 624 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 C5orf42Q9H799 3197 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 TRIP11Q15643 1979 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 ATF7P17544 494 aaPredicted RBP15.46■□□□□ 0.07
PRAME-209ENST00000439106 IRS1P35568 1242 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 PBX3P40426 434 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 FAM189BP81408 668 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 GNL2Q13823 731 aaKnown RBP15.46■□□□□ 0.07
PRAME-209ENST00000439106 AAK1Q2M2I8 961 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 ECHDC2Q86YB7 292 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 PIGOQ8TEQ8 1089 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 HSD17B14Q9BPX1 270 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 CWH43Q9H720 699 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 IFT122Q9HBG6 1241 aa15.46■□□□□ 0.07
PRAME-209ENST00000439106 PIN4Q9Y237 131 aaKnown RBP15.46■□□□□ 0.07
PRAME-209ENST00000439106 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.45■□□□□ 0.06
PRAME-209ENST00000439106 H3BQ06 376 aaPredicted RBP15.45■□□□□ 0.06
PRAME-209ENST00000439106 SRGAP2CP0DJJ0 459 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 SFPQP23246 707 aaKnown RBP eCLIP15.45■□□□□ 0.06
PRAME-209ENST00000439106 RFC5P40937 340 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 CLLU1OSQ5K130 101 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 LRRC55Q6ZSA7 311 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 CATSPER4Q7RTX7 472 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 ADGRD2Q7Z7M1 963 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 ZNF410Q86VK4 478 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 NOSTRINQ8IVI9 506 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 SPPL3Q8TCT6 385 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 HELQQ8TDG4 1101 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 PRPF31Q8WWY3 499 aaKnown RBP15.45■□□□□ 0.06
PRAME-209ENST00000439106 LPPQ93052 612 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 P2RX5Q93086 422 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 MTRQ99707 1265 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 JPH2Q9BR39 696 aaPredicted RBP15.45■□□□□ 0.06
PRAME-209ENST00000439106 PLVAPQ9BX97 442 aa15.45■□□□□ 0.06
PRAME-209ENST00000439106 FOXP1Q9H334 677 aaPredicted RBP15.45■□□□□ 0.06
PRAME-209ENST00000439106 ELAC1Q9H777 363 aaKnown RBP15.45■□□□□ 0.06
PRAME-209ENST00000439106 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 TNFRSF10AO00220 468 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 LINC01565O15544 149 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 ST18O60284 1047 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 MED24O75448 989 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 OR52Z1P0C646 297 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 TECP42680 631 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 LAMTOR4Q0VGL1 99 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 TWF2Q6IBS0 349 aaKnown RBP15.44■□□□□ 0.06
PRAME-209ENST00000439106 OTUD6AQ7L8S5 288 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 ZNF598Q86UK7 904 aaKnown RBP15.44■□□□□ 0.06
PRAME-209ENST00000439106 ZNF710Q8N1W2 664 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 COLGALT1Q8NBJ5 622 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 ASAP3Q8TDY4 903 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 POF1BQ8WVV4 589 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 PSPC1Q8WXF1 523 aaKnown RBP15.44■□□□□ 0.06
PRAME-209ENST00000439106 TMX3Q96JJ7 454 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 TMEM117Q9H0C3 514 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 LMAN2LQ9H0V9 348 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 IGFLR1Q9H665 355 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 CLDND1Q9NY35 253 aa15.44■□□□□ 0.06
PRAME-209ENST00000439106 A0A0U1RQF3 1178 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 USO1O60763 962 aaKnown RBP15.43■□□□□ 0.06
PRAME-209ENST00000439106 SPATA31C1P0DKV0 1188 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 IL9P15248 144 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 RARRES1P49788 294 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 DLX2Q07687 328 aaPredicted RBP15.43■□□□□ 0.06
PRAME-209ENST00000439106 HYAL1Q12794 435 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 CLUL1Q15846 466 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 THNSL1Q8IYQ7 743 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 ABI1Q8IZP0 508 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 RNF149Q8NC42 400 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.43■□□□□ 0.06
PRAME-209ENST00000439106 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
PRAME-209ENST00000439106 UPF2Q9HAU5 1272 aaKnown RBP15.43■□□□□ 0.06
PRAME-209ENST00000439106 FGF18O76093 207 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 LYPLA2O95372 231 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 PHKA2P46019 1235 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 TOB1P50616 345 aaPredicted RBP15.42■□□□□ 0.06
PRAME-209ENST00000439106 CDC42EP1Q00587 391 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 MAEAQ7L5Y9 396 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 RBM23Q86U06 439 aaKnown RBP15.42■□□□□ 0.06
PRAME-209ENST00000439106 CATSPER3Q86XQ3 398 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 TCP11Q8WWU5 503 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 PABPC5Q96DU9 382 aaKnown RBP15.42■□□□□ 0.06
PRAME-209ENST00000439106 CCDC43Q96MW1 224 aaKnown RBP15.42■□□□□ 0.06
PRAME-209ENST00000439106 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 INO80BQ9C086 356 aaPredicted RBP15.42■□□□□ 0.06
PRAME-209ENST00000439106 FAM105AQ9NUU6 356 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 DACT1Q9NYF0 836 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 PPME1Q9Y570 386 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 PCDHB6Q9Y5E3 794 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 PCDHB12Q9Y5F1 795 aa15.42■□□□□ 0.06
PRAME-209ENST00000439106 HOXA2O43364 376 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 TBX10O75333 385 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 LAG3P18627 525 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.063e-26■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms