RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 IRF6O14896 467 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 AFPP02771 609 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 GNAT1P11488 350 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 GM2AP17900 193 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 ATP4AP20648 1035 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 PDE6CP51160 858 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 LACTBP83111 547 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 ATP11AP98196 1134 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 MESDQ14696 234 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 IFI16Q16666 785 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CRELD2Q6UXH1 353 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SRRM1Q8IYB3 904 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CYP4X1Q8N118 509 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 ANKLE1Q8NAG6 615 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 NAF1Q96HR8 494 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 EYA3Q99504 573 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 METTL5Q9NRN9 209 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 ATP8A2Q9NTI2 1148 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 NUP98P52948 1817 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 RIPK2O43353 540 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 ENTPD5O75356 428 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SPAG7O75391 227 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SUN1O94901 812 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 RASA1P20936 1047 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 GNAQP50148 359 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 EIF3BP55884 814 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 MAPK7Q13164 816 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 COG2Q14746 738 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 TTBK2Q6IQ55 1244 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 TRMT1LQ7Z2T5 733 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SPATA21Q7Z572 469 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 RASGEF1CQ8N431 466 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SUPT20HQ8NEM7 779 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 P3H4Q92791 437 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 TGS1Q96RS0 853 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 PPP1R12CQ9BZL4 782 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 NSRP1Q9H0G5 558 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 GOLGA6L10A0A0M3HER8 536 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 PIAS1O75925 651 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CCND1P24385 295 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 YY1P25490 414 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CHKAP35790 457 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SNAP25P60880 206 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 TBC1D10BQ4KMP7 808 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 RNF220Q5VTB9 566 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CGB2Q6NT52 195 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CCDC137Q6PK04 289 aaKnown RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 NSMFQ6X4W1 530 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 PROM2Q8N271 834 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 PRELID2Q8N945 189 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SLC20A1Q8WUM9 679 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 C1orf54Q8WWF1 131 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 CTNNBL1Q8WYA6 563 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-204ENST00000438964 SUGT1Q9Y2Z0 365 aa14.44□□□□□ -0.1
ACTN1-204ENST00000438964 COL18A1P39060 1754 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 CFAP73A6NFT4 308 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 NTSR2O95665 410 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 GSTA1P08263 222 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 HIBADHP31937 336 aaKnown RBP14.43□□□□□ -0.1
ACTN1-204ENST00000438964 KYNUQ16719 465 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 NBPF20Q3BBV1 942 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 C11orf91Q3C1V1 193 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 ARSHQ5FYA8 562 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 DPY19L2P1Q6NXN4 242 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 RFX8Q6ZV50 586 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 CCDC65Q8IXS2 484 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 ATG4AQ8WYN0 398 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 ERP27Q96DN0 273 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 SLCO1B3Q9NPD5 702 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 ZFATQ9P243 1243 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 CPSF2Q9P2I0 782 aaKnown RBP14.43□□□□□ -0.1
ACTN1-204ENST00000438964 UBR2Q8IWV8 1755 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 MED24O75448 989 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 CBX6O95503 412 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 CYP11B2P19099 503 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 HOXD13P35453 343 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 ADCY7P51828 1080 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 MXRA7P84157 204 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 BNIP1Q12981 228 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 ECHDC2Q86YB7 292 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 UCMAQ8WVF2 138 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 PGM2Q96G03 612 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 CTTNBP2NLQ9P2B4 639 aa14.43□□□□□ -0.1
ACTN1-204ENST00000438964 DLATP10515 647 aaKnown RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 BRD2P25440 801 aaKnown RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 BLMHQ13867 455 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 DRAP1Q14919 205 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 ZC2HC1CQ53FD0 456 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 DAB2IPQ5VWQ8 1189 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 VSTM1Q6UX27 236 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms