RNA–Protein interactions for RNA: ENST00000438823.1

DUSP28-203, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-203ENST00000438823 POLR3CQ9BUI4 534 aaPredicted RBP22.03■■□□□ 1.12
DUSP28-203ENST00000438823 COL25A1Q9BXS0 654 aaPredicted RBP22.03■■□□□ 1.12
DUSP28-203ENST00000438823 IFT122Q9HBG6 1241 aa22.03■■□□□ 1.12
DUSP28-203ENST00000438823 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.03■■□□□ 1.12
DUSP28-203ENST00000438823 ATG2AQ2TAZ0 1938 aa22.03■■□□□ 1.12
DUSP28-203ENST00000438823 MUC3AQ02505 3323 aa22.03■■□□□ 1.12
DUSP28-203ENST00000438823 LAD1O00515 517 aa22.02■■□□□ 1.12
DUSP28-203ENST00000438823 EOMESO95936 686 aa22.02■■□□□ 1.12
DUSP28-203ENST00000438823 RARRES1P49788 294 aa22.02■■□□□ 1.12
DUSP28-203ENST00000438823 FXR2P51116 673 aaKnown RBP eCLIP22.02■■□□□ 1.12
DUSP28-203ENST00000438823 MXD4Q14582 209 aaPredicted RBP22.02■■□□□ 1.12
DUSP28-203ENST00000438823 PCBP1Q15365 356 aaKnown RBP eCLIP22.02■■□□□ 1.12
DUSP28-203ENST00000438823 SRGAP1Q7Z6B7 1085 aa22.02■■□□□ 1.12
DUSP28-203ENST00000438823 ECHDC2Q86YB7 292 aa22.02■■□□□ 1.12
DUSP28-203ENST00000438823 PRPF31Q8WWY3 499 aaKnown RBP22.02■■□□□ 1.12
DUSP28-203ENST00000438823 HLA-CQ95604 372 aa22.02■■□□□ 1.12
DUSP28-203ENST00000438823 CCDC43Q96MW1 224 aaKnown RBP22.02■■□□□ 1.12
DUSP28-203ENST00000438823 CUL9Q8IWT3 2517 aa22.02■■□□□ 1.11
DUSP28-203ENST00000438823 SPATA31C1P0DKV0 1188 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 SKIP12755 728 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 RPA1P27694 616 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 TECP42680 631 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 POU5F1BQ06416 359 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 LAMTOR4Q0VGL1 99 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 CSPP1Q1MSJ5 1256 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 PAN2Q504Q3 1202 aaKnown RBP22.01■■□□□ 1.11
DUSP28-203ENST00000438823 HAUS3Q68CZ6 603 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 FERMT3Q86UX7 667 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 KSR1Q8IVT5 923 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 TMEM143Q96AN5 459 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 TMEM117Q9H0C3 514 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 AAASQ9NRG9 546 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 STK24Q9Y6E0 443 aa22.01■■□□□ 1.11
DUSP28-203ENST00000438823 TBKBP1A7MCY6 615 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 ZBTB39O15060 712 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 GJB2P29033 226 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 FAM102BQ5T8I3 360 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 CATSPER3Q86XQ3 398 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 C4orf32Q8N8J7 132 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 BACH2Q9BYV9 841 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 RAB34Q9BZG1 259 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 NSUN3Q9H649 340 aaKnown RBP22■■□□□ 1.11
DUSP28-203ENST00000438823 XPNPEP1Q9NQW7 623 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 AGPAT5Q9NUQ2 364 aa22■■□□□ 1.11
DUSP28-203ENST00000438823 DBR1Q9UK59 544 aaKnown RBP22■■□□□ 1.11
DUSP28-203ENST00000438823 FGFR4P22455 802 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 GATMP50440 423 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 TOB1P50616 345 aaPredicted RBP21.99■■□□□ 1.11
DUSP28-203ENST00000438823 RAB27AP51159 221 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 PDIA5Q14554 519 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 RILPL1Q5EBL4 403 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 CATSPER4Q7RTX7 472 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 ZNF598Q86UK7 904 aaKnown RBP21.99■■□□□ 1.11
DUSP28-203ENST00000438823 ABI1Q8IZP0 508 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 NACC1Q96RE7 527 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 NFKBIZQ9BYH8 718 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 PLAGL2Q9UPG8 496 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 SMC3Q9UQE7 1217 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 PCDHB12Q9Y5F1 795 aa21.99■■□□□ 1.11
DUSP28-203ENST00000438823 H3BQV1 296 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 NCK2O43639 380 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 CSDE1O75534 798 aaKnown RBP21.98■■□□□ 1.11
DUSP28-203ENST00000438823 FGFR1P11362 822 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 PRPHP41219 470 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 PHKA2P46019 1235 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 UBE3AQ05086 875 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 TFDP1Q14186 410 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 IFNLR1Q8IU57 520 aaPredicted RBP21.98■■□□□ 1.11
DUSP28-203ENST00000438823 LRRC43Q8N309 656 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 RNF149Q8NC42 400 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 RNF19AQ9NV58 838 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 PIN4Q9Y237 131 aaKnown RBP21.98■■□□□ 1.11
DUSP28-203ENST00000438823 PLXNA4Q9HCM2 1894 aa21.98■■□□□ 1.11
DUSP28-203ENST00000438823 BRWD1Q9NSI6 2320 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 GRM6O15303 877 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 ZNF623O75123 536 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 MED24O75448 989 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 SRGAP2CP0DJJ0 459 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 LAG3P18627 525 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 IBSPP21815 317 aaPredicted RBP21.97■■□□□ 1.11
DUSP28-203ENST00000438823 ARL2P36404 184 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 PTGDRQ13258 359 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 COL19A1Q14993 1142 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 TWF2Q6IBS0 349 aaKnown RBP21.97■■□□□ 1.11
DUSP28-203ENST00000438823 IGSF22Q8N9C0 903 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 KLHL23Q8NBE8 558 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 MCPH1Q8NEM0 835 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 PIGOQ8TEQ8 1089 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 CASD1Q96PB1 797 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 MRPL9Q9BYD2 267 aaKnown RBP21.97■■□□□ 1.11
DUSP28-203ENST00000438823 BMP2KQ9NSY1 1161 aaPredicted RBP21.97■■□□□ 1.11
DUSP28-203ENST00000438823 PCDHB6Q9Y5E3 794 aa21.97■■□□□ 1.11
DUSP28-203ENST00000438823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.96■■□□□ 1.11
DUSP28-203ENST00000438823 CARNS1A5YM72 827 aa21.96■■□□□ 1.11
DUSP28-203ENST00000438823 ITGB1P05556 798 aa21.96■■□□□ 1.11
DUSP28-203ENST00000438823 ATF7P17544 494 aaPredicted RBP21.96■■□□□ 1.11
DUSP28-203ENST00000438823 PTENP60484 403 aa21.96■■□□□ 1.11
DUSP28-203ENST00000438823 CUL4AQ13619 759 aa21.96■■□□□ 1.11
DUSP28-203ENST00000438823 NBR1Q14596 966 aa21.96■■□□□ 1.11
DUSP28-203ENST00000438823 MCTP1Q6DN14 999 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms