RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ERVK-5Q9HDB9 667 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 STK17AQ9UEE5 414 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 PADI3Q9ULW8 664 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 SQORQ9Y6N5 450 aa17.92■□□□□ 0.46
SNRPB-202ENST00000438552 NPHP3-ACAD11A0A0J9YXS1 232 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 HIP1RO75146 1068 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 BAIAP3O94812 1187 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 EIF4BP23588 611 aaKnown RBP17.91■□□□□ 0.46
SNRPB-202ENST00000438552 MXD4Q14582 209 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-202ENST00000438552 RASIP1Q5U651 963 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 DAW1Q8N136 415 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 ZNF710Q8N1W2 664 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 APBB2Q92870 758 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 GCOM2Q9BZD3 368 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-202ENST00000438552 MTIF3Q9H2K0 278 aaKnown RBP17.91■□□□□ 0.46
SNRPB-202ENST00000438552 IFT122Q9HBG6 1241 aa17.91■□□□□ 0.46
SNRPB-202ENST00000438552 A0A1W2PPC1 479 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 LRRIQ4A6NIV6 560 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 ASAP2O43150 1006 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 GUCY2CP25092 1073 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 PHKA2P46019 1235 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 WDR5P61964 334 aaKnown RBP17.9■□□□□ 0.46
SNRPB-202ENST00000438552 CDC42EP1Q00587 391 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
SNRPB-202ENST00000438552 NFX1Q12986 1120 aaKnown RBP17.9■□□□□ 0.46
SNRPB-202ENST00000438552 MAPK7Q13164 816 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 IKBKEQ14164 716 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 TFDP1Q14186 410 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 ARSHQ5FYA8 562 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 LINC01599Q8WXQ3 324 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 DHX58Q96C10 678 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 MINDY3Q9H8M7 445 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 FAM13BQ9NYF5 915 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 ST3GAL5Q9UNP4 418 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 LAMA3Q16787 3333 aa17.9■□□□□ 0.46
SNRPB-202ENST00000438552 ABHD14A-ACY1A0A1B0GW23 586 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 MGEA5O60502 916 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 DEFB103AP81534 67 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 E2F4Q16254 413 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 FAM109BQ6ICB4 259 aaPredicted RBP17.89■□□□□ 0.45
SNRPB-202ENST00000438552 KIFAP3Q92845 792 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 REEP2Q9BRK0 252 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 TMX1Q9H3N1 280 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
SNRPB-202ENST00000438552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.88■□□□□ 0.45
SNRPB-202ENST00000438552 GPR182O15218 404 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 PFKFB1P16118 471 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 SFPQP23246 707 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNRPB-202ENST00000438552 KCNJ6P48051 423 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.88■□□□□ 0.451e-9■■■■■ 78.4
SNRPB-202ENST00000438552 TMCO2Q7Z6W1 182 aaPredicted RBP17.88■□□□□ 0.45
SNRPB-202ENST00000438552 DRC1Q96MC2 740 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 KIFC3Q9BVG8 833 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 TIPINQ9BVW5 301 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 KCND2Q9NZV8 630 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 ADGRA3Q8IWK6 1321 aa17.88■□□□□ 0.45
SNRPB-202ENST00000438552 A0A1B0GVL5 298 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 POLR2DO15514 142 aaKnown RBP17.87■□□□□ 0.45
SNRPB-202ENST00000438552 EFCAB14O75071 495 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 KRT18P05783 430 aaKnown RBP17.87■□□□□ 0.45
SNRPB-202ENST00000438552 CMA1P23946 247 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 NAMPTP43490 491 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 PTENP60484 403 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 PPP2R5AQ15172 486 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 ODR4Q5SWX8 454 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 CDCA2Q69YH5 1023 aaPredicted RBP17.87■□□□□ 0.45
SNRPB-202ENST00000438552 CATSPER4Q7RTX7 472 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 SRGAP1Q7Z6B7 1085 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 IFNLR1Q8IU57 520 aaPredicted RBP17.87■□□□□ 0.45
SNRPB-202ENST00000438552 IFT74Q96LB3 600 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 GOLPH3LQ9H4A5 285 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 KCNH3Q9ULD8 1083 aa17.87■□□□□ 0.45
SNRPB-202ENST00000438552 MYMKA6NI61 221 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 SFI1A8K8P3 1242 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 GRXCR1A8MXD5 290 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 INO80B-WBP1J3KQ70 363 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
SNRPB-202ENST00000438552 PEX3P56589 373 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 MBTD1Q05BQ5 628 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 POU5F1BQ06416 359 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 SV2BQ7L1I2 683 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 DYMQ7RTS9 669 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 MYOCDQ8IZQ8 938 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 IQUBQ8NA54 791 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 DEPTORQ8TB45 409 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
SNRPB-202ENST00000438552 STAMQ92783 540 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 SLC9A7Q96T83 725 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 FTHL17Q9BXU8 183 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 INO80BQ9C086 356 aaPredicted RBP17.86■□□□□ 0.45
SNRPB-202ENST00000438552 ODF2LQ9ULJ1 636 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 PIN4Q9Y237 131 aaKnown RBP17.86■□□□□ 0.45
SNRPB-202ENST00000438552 TTC3P53804 2025 aa17.86■□□□□ 0.45
SNRPB-202ENST00000438552 A0A1W2PQ27 194 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 A0A1W2PQ64 194 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 A0A1W2PQD8 194 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 DENND3A2RUS2 1198 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms