RNA–Protein interactions for RNA: ENST00000437736.5

PSMD4-204, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 787 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-204	ENST00000437736	TMEM40	Q8WWA1	233 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	BSND	Q8WZ55	320 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	KIFAP3	Q92845	792 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	VWCE	Q96DN2	955 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	DRC1	Q96MC2	740 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	REEP2	Q9BRK0	252 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	PYM1	Q9BRP8	204 aa	Known RBP	11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	OSBPL7	Q9BZF2	842 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	ADAMTS10	Q9H324	1103 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	CUEDC2	Q9H467	287 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	ZHX3	Q9H4I2	956 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	CDHR5	Q9HBB8	845 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	KCND2	Q9NZV8	630 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	SERTAD1	Q9UHV2	236 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	HPSE	Q9Y251	543 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	EVPL	Q92817	2033 aa		11.16	□□□□□ -0.62
PSMD4-204	ENST00000437736	SCN5A	Q14524	2016 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	SFI1	A8K8P3	1242 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	GRXCR1	A8MXD5	290 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	ACTN4	O43707	911 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	PRPF40A	O75400	957 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	CSDE1	O75534	798 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	FAM13A	O94988	1023 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	GUCY2C	P25092	1073 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	AFM	P43652	599 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	PHKA2	P46019	1235 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	CRYBB1	P53674	252 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	MAPK7	Q13164	816 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	PAK2	Q13177	524 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	TFDP1	Q14186	410 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	MXD4	Q14582	209 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	GPNMB	Q14956	572 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	ARSH	Q5FYA8	562 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	FBXO47	Q5MNV8	452 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	ZNF410	Q86VK4	478 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	GRAMD1C	Q8IYS0	662 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	DAW1	Q8N136	415 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	HERVK_113	Q902F9	699 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	IFT74	Q96LB3	600 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	KIFC3	Q9BVG8	833 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	TIPIN	Q9BVW5	301 aa		11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	IFIH1	Q9BYX4	1025 aa	Known RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD4-204	ENST00000437736	SZT2	Q5T011	3432 aa		11.15	□□□□□ -0.63
PSMD4-204	ENST00000437736	FAM237A	A0A1B0GTK4	181 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	MYMK	A6NI61	221 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	CCDC169	A6NNP5	214 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	ASAP2	O43150	1006 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	RPS6KA5	O75582	802 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	PARN	O95453	639 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	PFKM	P08237	780 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	ACTN1	P12814	892 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	IDE	P14735	1019 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	DARS	P14868	501 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	LIG1	P18858	919 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	FGFR4	P22455	802 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	CD52	P31358	61 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	PEX3	P56589	373 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	CDC42EP1	Q00587	391 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	FAM160A1	Q05DH4	1040 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	NFX1	Q12986	1120 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	DMP1	Q13316	513 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	PPP2R5A	Q15172	486 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	TCTN1	Q2MV58	587 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	LONRF3	Q496Y0	759 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	CLEC17A	Q6ZS10	378 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	TSHZ1	Q6ZSZ6	1077 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	DEPTOR	Q8TB45	409 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	DDX12P	Q92771	950 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	BLZF1	Q9H2G9	400 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	MTIF3	Q9H2K0	278 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	TNMD	Q9H2S6	317 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	AGO3	Q9H9G7	860 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	MAGEF1	Q9HAY2	307 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	ODF2L	Q9ULJ1	636 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	NOC2L	Q9Y3T9	749 aa	Known RBP	11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	SLC4A7	Q9Y6M7	1214 aa		11.14	□□□□□ -0.63
PSMD4-204	ENST00000437736	GOLGA6L22	H0YM25	854 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	INO80B-WBP1	J3KQ70	363 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	ZNF202	O95125	648 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	CXCL10	P02778	98 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	SLFN14	P0C7P3	912 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	PLS3	P13797	630 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	SFPQ	P23246	707 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	EIF4B	P23588	611 aa	Known RBP	11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	CASP1	P29466	404 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	NAMPT	P43490	491 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	NPTX2	P47972	431 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	UBE2H	P62256	183 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	ASIC1	P78348	528 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	AMPD3	Q01432	767 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	GIT2	Q14161	759 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	ODR4	Q5SWX8	454 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	RASIP1	Q5U651	963 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	KRBA2	Q6ZNG9	492 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736		Q7L0L9	218 aa		11.13	□□□□□ -0.63
PSMD4-204	ENST00000437736	FAM228A	Q86W67	206 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms