RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 SSTP61278 116 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 GNG11P61952 73 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 GABREP78334 506 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 KRT76Q01546 638 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 KIF23Q02241 960 aaPredicted RBP6.98□□□□□ -1.29
MCF2-205ENST00000437564 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
MCF2-205ENST00000437564 ARID5BQ14865 1188 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 CYTH1Q15438 398 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 QPCTQ16769 361 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 GLE1Q53GS7 698 aaKnown RBP6.98□□□□□ -1.29
MCF2-205ENST00000437564 AKAP4Q5JQC9 854 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 FAM26DQ5JW98 314 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 FYB2Q5VWT5 728 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 OLFML2BQ68BL8 750 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 ZNF704Q6ZNC4 412 aaPredicted RBP6.98□□□□□ -1.29
MCF2-205ENST00000437564 CTAGE6Q86UF2 777 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 CTAGE4Q8IX94 777 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 NUP93Q8N1F7 819 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 NLGN1Q8N2Q7 840 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 ARRDC4Q8NCT1 418 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 C7orf57Q8NEG2 295 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 JDP2Q8WYK2 163 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 RNF166Q96A37 237 aaPredicted RBP6.98□□□□□ -1.29
MCF2-205ENST00000437564 FAM136AQ96C01 138 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 SLC39A13Q96H72 371 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 FAM20AQ96MK3 541 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 MRPL1Q9BYD6 325 aaKnown RBP6.98□□□□□ -1.29
MCF2-205ENST00000437564 CAAP1Q9H8G2 361 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 NEK6Q9HC98 313 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.98□□□□□ -1.29
MCF2-205ENST00000437564 HACD3Q9P035 362 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 KIF17Q9P2E2 1029 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 TELO2Q9Y4R8 837 aa6.98□□□□□ -1.29
MCF2-205ENST00000437564 SENP3-EIF4A1A0A087X0R7 540 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 A0A1W2PQ67 120 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 B8ZZF3 427 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 AGPSO00116 658 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 TRDMT1O14717 391 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 FGF18O76093 207 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ALOX5P09917 674 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 MYBL1P10243 752 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 RAC2P15153 192 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 GNAZP19086 355 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 SLC1A1P43005 524 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PCYT1AP49585 367 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PLCD1P51178 756 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 CACNA2D1P54289 1103 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 MLLT6P55198 1093 aaPredicted RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 POLR2GP62487 172 aaKnown RBP eCLIP6.97□□□□□ -1.29
MCF2-205ENST00000437564 PLCB3Q01970 1234 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PRKCEQ02156 737 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 EXOSC9Q06265 439 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 GOLGA8FQ08AF8 430 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 GOLGA8DPQ0D2H9 430 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 R3HDM1Q15032 1099 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 VPS72Q15906 364 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 HSP90AA5PQ58FG0 334 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 SLC10A5Q5PT55 438 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ANO1Q5XXA6 986 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 METTL2BQ6P1Q9 378 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 RSBN1LQ6PCB5 846 aaPredicted RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 BTN2A1Q7KYR7 527 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 FASTKD5Q7L8L6 764 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 ATG9AQ7Z3C6 839 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 UBE3BQ7Z3V4 1068 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 TMC7Q7Z402 723 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PNMA8AQ86V59 439 aaPredicted RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 TREML1Q86YW5 311 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ZBED8Q8IZ13 594 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 LZTR1Q8N653 840 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 CERKQ8TCT0 537 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PLEKHO2Q8TD55 490 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 HCAR2Q8TDS4 363 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 DHX58Q96C10 678 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 METTL2AQ96IZ6 378 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 EHD4Q9H223 541 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 IFT22Q9H7X7 185 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PRM3Q9NNZ6 103 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PANK4Q9NVE7 773 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 STRIP2Q9ULQ0 834 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 TBX22Q9Y458 520 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 MYO3BQ8WXR4 1341 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 E9PCH4 1651 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 POGZQ7Z3K3 1410 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 C17orf113A0A1B0GUU1 675 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PVALEFA0A1B0GWK0 134 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ARHGAP10A1A4S6 786 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 VWA3AA6NCI4 1184 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 GMNCA6NCL1 334 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 FAM205CA6NFA0 338 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 F8W810 466 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 APOL1O14791 398 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ARHGAP6O43182 974 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 NCK2O43639 380 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 LILRB3O75022 631 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 CNOT3O75175 753 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 BCAR3O75815 825 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ARHGEF15O94989 841 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms