RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ABHD10Q9NUJ1 306 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
PTPN13-204ENST00000436978 FARP1Q9Y4F1 1045 aaPredicted RBP16.95■□□□□ 0.3
PTPN13-204ENST00000436978 KRT37O76014 449 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TMCC1O94876 653 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 NFX1Q12986 1120 aaKnown RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 DNAJC8O75937 253 aaPredicted RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 CDR2Q01850 454 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TRIM68Q6AZZ1 485 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TMEM270Q6UE05 265 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 CNPY4Q8N129 248 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 KATNAL1Q9BW62 490 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 FGFR1OP2Q9NVK5 253 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 ZNF212Q9UDV6 495 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 CLTAP09496 248 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 ZFXP17010 805 aaPredicted RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 EFNA5P52803 228 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 AFG1LQ8WV93 481 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 DYDC2Q96IM9 177 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TFDP2Q14188 446 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 ZNF560Q96MR9 790 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TKFCQ3LXA3 575 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 HSP90AA5PQ58FG0 334 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TADA2BQ86TJ2 420 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 CRLF3Q8IUI8 442 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 GABBR1Q9UBS5 961 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 TRIM67Q6ZTA4 783 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 EFHBQ8N7U6 833 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 MMTAG2Q9BU76 263 aaKnown RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 FAM96AQ9H5X1 160 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 NGRNQ9NPE2 291 aaKnown RBP16.94■□□□□ 0.3
PTPN13-204ENST00000436978 CCDC151A5D8V7 595 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 SFI1A8K8P3 1242 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 FAM213AQ9BRX8 229 aa16.94■□□□□ 0.3
PTPN13-204ENST00000436978 GNA15P30679 374 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 STRIP1Q5VSL9 837 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 PPME1Q9Y570 386 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 YWHAHQ04917 246 aaPredicted RBP16.93■□□□□ 0.3
PTPN13-204ENST00000436978 SLC12A1Q13621 1099 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
PTPN13-204ENST00000436978 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 GPD1LQ8N335 351 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 SNX2O60749 519 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 THNSL1Q8IYQ7 743 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 ZBTB18Q99592 522 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 DPYSL4O14531 572 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 FGGP02679 453 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 USP17L6PQ6QN14 398 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 FBXL13Q8NEE6 735 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
PTPN13-204ENST00000436978 SARM1Q6SZW1 724 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 MB21D2Q8IYB1 491 aaPredicted RBP16.93■□□□□ 0.3
PTPN13-204ENST00000436978 FBXO41Q8TF61 875 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
PTPN13-204ENST00000436978 CNOT8Q9UFF9 292 aaKnown RBP16.93■□□□□ 0.3
PTPN13-204ENST00000436978 POLIQ9UNA4 740 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 GGPS1O95749 300 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 STAT3P40763 770 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 FOXO4P98177 505 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 EXOC4Q96A65 974 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 INPP5FQ9Y2H2 1132 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 ITPRIPL1Q6GPH6 555 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 NUP85Q9BW27 656 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 PYCARDQ9ULZ3 195 aa16.93■□□□□ 0.3
PTPN13-204ENST00000436978 PHEXP78562 749 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 SWSAP1Q6NVH7 229 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 AIFM3Q96NN9 605 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 GRID2IPA4D2P6 1211 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 F5H6K3 240 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 KLRC3Q07444 240 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 TBK1Q9UHD2 729 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 PPP1R9AQ9ULJ8 1098 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 TRIM33Q9UPN9 1127 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 CTNND1O60716 968 aaKnown RBP16.92■□□□□ 0.3
PTPN13-204ENST00000436978 KCNH2Q12809 1159 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 PDCD2Q16342 344 aaPredicted RBP16.92■□□□□ 0.3
PTPN13-204ENST00000436978 GIPC2Q8TF65 315 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 SLC9A2Q9UBY0 812 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 CSPG5O95196 566 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 IFNAR2P48551 515 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 SLC16A4O15374 487 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 ZRANB2O95218 330 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTPN13-204ENST00000436978 SCN4BQ8IWT1 228 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 PFASO15067 1338 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 PALMO75781 387 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 PPP6R3Q5H9R7 873 aaPredicted RBP16.92■□□□□ 0.3
PTPN13-204ENST00000436978 OTUD5Q96G74 571 aa16.92■□□□□ 0.3
PTPN13-204ENST00000436978 RFC1P35251 1148 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-204ENST00000436978 KLHL38Q2WGJ6 581 aa16.91■□□□□ 0.3
PTPN13-204ENST00000436978 NUDT18Q6ZVK8 323 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms